RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 UTP11Q9Y3A2 253 aaKnown RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 FERP16591 822 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 BCAS4Q8TDM0 211 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 HDAC7Q8WUI4 952 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 ZNF70Q9UC06 446 aaPredicted RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 BZW2Q9Y6E2 419 aaKnown RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 HNRNPDLO14979 420 aaKnown RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 EYA4O95677 639 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 CTNNA1P35221 906 aaKnown RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 GIT2Q14161 759 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 PPP1R7Q15435 360 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 EEPD1Q7L9B9 569 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 USP37Q86T82 979 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 AKAP3O75969 853 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 SEMA3FQ13275 785 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 SLC18A3Q16572 532 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 C15orf52Q6ZUT6 534 aaKnown RBP16.14■□□□□ 0.17
NEK9-209ENST00000556170 MICALL1Q8N3F8 863 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 L1RE1Q9UN81 338 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 EML1O00423 815 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 RGL2O15211 777 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 ARP10275 920 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 MAP2K1Q02750 393 aaPredicted RBP16.14■□□□□ 0.17
NEK9-209ENST00000556170 GABPAQ06546 454 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 MTMR1Q13613 665 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 RASA3Q14644 834 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 KRT71Q3SY84 523 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 DACT2Q5SW24 774 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 CCDC105Q8IYK2 499 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 EXOC4Q96A65 974 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 PPANQ9NQ55 473 aaKnown RBP16.14■□□□□ 0.17
NEK9-209ENST00000556170 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 PDE2AO00408 941 aaPredicted RBP16.14■□□□□ 0.17
NEK9-209ENST00000556170 HIP1RO75146 1068 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 ACTN2P35609 894 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 TTC31Q49AM3 519 aaPredicted RBP16.14■□□□□ 0.17
NEK9-209ENST00000556170 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 TAOK3Q9H2K8 898 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
NEK9-209ENST00000556170 ZRANB2O95218 330 aaKnown RBP eCLIP16.13■□□□□ 0.17
NEK9-209ENST00000556170 EPHB4P54760 987 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
NEK9-209ENST00000556170 SAAL1Q96ER3 474 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 CCDC114Q96M63 670 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 PTPN22Q9Y2R2 807 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 BCL9LQ86UU0 1499 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 TAF1P21675 1872 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 CCT5P48643 541 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 SEL1L2Q5TEA6 688 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 RINT1Q6NUQ1 792 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
NEK9-209ENST00000556170 PDXKO00764 312 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 MEIS2O14770 477 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 FGGP02679 453 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 COG2Q14746 738 aa16.13■□□□□ 0.17
NEK9-209ENST00000556170 SYT2Q8N9I0 419 aaPredicted RBP16.13■□□□□ 0.17
NEK9-209ENST00000556170 AKAP11Q9UKA4 1901 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 A0A1W2PRG0 241 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 M0R2N6 131 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 POLD1P28340 1107 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 CIAPIN1Q6FI81 312 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 GIMAP7Q8NHV1 300 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 SEPT9Q9UHD8 586 aaPredicted RBP16.12■□□□□ 0.17
NEK9-209ENST00000556170 COL14A1Q05707 1796 aaKnown RBP16.12■□□□□ 0.17
NEK9-209ENST00000556170 N4BP2Q86UW6 1770 aaPredicted RBP16.12■□□□□ 0.17
NEK9-209ENST00000556170 A0A1W2PQJ5 194 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 PGRMC1O00264 195 aaKnown RBP16.12■□□□□ 0.17
NEK9-209ENST00000556170 MXI1P50539 228 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 TNFAIP1Q13829 316 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 CCNI2Q6ZMN8 369 aaPredicted RBP16.12■□□□□ 0.17
NEK9-209ENST00000556170 PAGR1Q9BTK6 254 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 CAPS2Q9BXY5 557 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 BCAS3Q9H6U6 928 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 ZSCAN5CA6NGD5 496 aaPredicted RBP16.12■□□□□ 0.17
NEK9-209ENST00000556170 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 CTNNA2P26232 953 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 NPEPPSP55786 919 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 WDR44Q5JSH3 913 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 FAM160B2Q86V87 743 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 ANKFY1Q9P2R3 1169 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 RASAL2Q9UJF2 1139 aa16.12■□□□□ 0.17
NEK9-209ENST00000556170 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 CLGNO14967 610 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 ENTPD3O75355 529 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 DMP1Q13316 513 aaPredicted RBP16.11■□□□□ 0.17
NEK9-209ENST00000556170 TMEM119Q4V9L6 283 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 ZNF772Q68DY9 489 aaPredicted RBP16.11■□□□□ 0.17
NEK9-209ENST00000556170 LRRC55Q6ZSA7 311 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 GSTA5Q7RTV2 222 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 UBL4BQ8N7F7 174 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 EXOC7Q9UPT5 735 aa16.11■□□□□ 0.17
NEK9-209ENST00000556170 SIK3Q9Y2K2 1263 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms