RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PEX10O60683 326 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 EIF3JO75822 258 aaKnown RBP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 ICAM3P32942 547 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 FXR1P51114 621 aaKnown RBP eCLIP16.25■□□□□ 0.19
VPS33B-205ENST00000556096 STXBP2Q15833 593 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 FKBP15Q5T1M5 1219 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 MYCT1Q8N699 235 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 CPLX3Q8WVH0 158 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 TIPINQ9BVW5 301 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 ANKEF1Q9NU02 776 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 PCDHA10Q9Y5I2 948 aa16.25■□□□□ 0.19
VPS33B-205ENST00000556096 CALUO43852 315 aaPredicted RBP16.24■□□□□ 0.19
VPS33B-205ENST00000556096 MYBP10242 640 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 HOXD13P35453 343 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 RARRES1P49788 294 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 PADI6Q6TGC4 694 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 NDST4Q9H3R1 872 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 LCTP09848 1927 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 UBE4BO95155 1302 aa16.24■□□□□ 0.19
VPS33B-205ENST00000556096 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 CETN3O15182 167 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 DKC1O60832 514 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPS33B-205ENST00000556096 GCNT3O95395 438 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
VPS33B-205ENST00000556096 ALDH5A1P51649 535 aaPredicted RBP16.23■□□□□ 0.19
VPS33B-205ENST00000556096 CNTN2Q02246 1040 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 FIZ1Q96SL8 496 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
VPS33B-205ENST00000556096 TRMT1Q9NXH9 659 aaKnown RBP16.23■□□□□ 0.19
VPS33B-205ENST00000556096 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 TSKSQ9UJT2 592 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 CAPN11Q9UMQ6 739 aa16.23■□□□□ 0.19
VPS33B-205ENST00000556096 SFI1A8K8P3 1242 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PRPF6O94906 941 aaKnown RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 CYP2C8P10632 490 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 EDNRBP24530 442 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 MAP2K2P36507 400 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 MAPK7Q13164 816 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ADAM9Q13443 819 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PTPN14Q15678 1187 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 NFIL3Q16649 462 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ZNF720Q7Z2F6 126 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PAGR1Q9BTK6 254 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ABHD10Q9NUJ1 306 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 SLC45A1Q9Y2W3 748 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 KIF2AO00139 706 aaPredicted RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PDHXO00330 501 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 NKRFO15226 690 aaKnown RBP eCLIP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ZSCAN12O43309 604 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 HIP1RO75146 1068 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 TUBB4AP04350 444 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PSAPP07602 524 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 TNNT1P13805 278 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ERCC3P19447 782 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 KRT9P35527 623 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 TM4SF4P48230 202 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 SYCP1Q15431 976 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 UGCGQ16739 394 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 CCDC40Q4G0X9 1142 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ANKRD23Q86SG2 305 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 TMTC1Q8IUR5 882 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 FAM178BQ8IXR5 827 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 DAW1Q8N136 415 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PPP1R13BQ96KQ4 1090 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 C16orf45Q96MC5 204 aaPredicted RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 TTYH3Q9C0H2 523 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 BCAS3Q9H6U6 928 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 POLD4Q9HCU8 107 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 JPH1Q9HDC5 661 aaPredicted RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 SLC9A2Q9UBY0 812 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 LUC7L2Q9Y383 392 aaKnown RBP16.22■□□□□ 0.19
VPS33B-205ENST00000556096 ASTN1O14525 1302 aa16.22■□□□□ 0.19
VPS33B-205ENST00000556096 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 TTC26A0AVF1 554 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 SOWAHBA6NEL2 793 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 RNF225M0QZC1 329 aaPredicted RBP16.21■□□□□ 0.19
VPS33B-205ENST00000556096 TRPA1O75762 1119 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
VPS33B-205ENST00000556096 RPL13P26373 211 aaKnown RBP16.21■□□□□ 0.19
VPS33B-205ENST00000556096 NMT1P30419 496 aaKnown RBP16.21■□□□□ 0.19
VPS33B-205ENST00000556096 ODR4Q5SWX8 454 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 KIAA1217Q5T5P2 1943 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 TRIM59Q8IWR1 403 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 OR8K1Q8NGG5 319 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 ATP6V0A1Q93050 837 aa16.21■□□□□ 0.19
VPS33B-205ENST00000556096 STRA6Q9BX79 667 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms