RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-233ENST00000555816 HAUS7Q99871 368 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 TEX13AQ9BXU3 409 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-233ENST00000555816 PPT2Q9UMR5 302 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 COL15A1P39059 1388 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
ATXN3-233ENST00000555816 NPHP1O15259 732 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 CBFA2T2O43439 604 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 ASGR2P07307 311 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 IFNGR1P15260 489 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 MAP2K2P36507 400 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 SEPHS1P49903 392 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 ST5P78524 1137 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 NFKB2Q00653 900 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 GNPTABQ3T906 1256 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 ZNF654Q8IZM8 581 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 ARHGEF39Q8N4T4 335 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 CNBD1Q8NA66 436 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 ALG3Q92685 438 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-233ENST00000555816 USP40Q9NVE5 1235 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
ATXN3-233ENST00000555816 FZD9O00144 591 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
ATXN3-233ENST00000555816 IL13P35225 146 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 IL6STP40189 918 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-233ENST00000555816 SOX9P48436 509 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 HDLBPQ00341 1268 aaKnown RBP6.54□□□□□ -1.36
ATXN3-233ENST00000555816 SLC7A5Q01650 507 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 UBXN11Q5T124 520 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 GPC2Q8N158 579 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 KLHL25Q9H0H3 589 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 ADAM7Q9H2U9 754 aa6.54□□□□□ -1.36
ATXN3-233ENST00000555816 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-233ENST00000555816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-233ENST00000555816 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
ATXN3-233ENST00000555816 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-233ENST00000555816 C2orf71A6NGG8 1288 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 CA12O43570 354 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 NPR1P16066 1061 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 PAMP19021 973 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 GIPRP48546 466 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 EIF6P56537 245 aaKnown RBP6.53□□□□□ -1.36
ATXN3-233ENST00000555816 RTP5Q14D33 572 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 ZXDCQ2QGD7 858 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-233ENST00000555816 ZNF394Q53GI3 561 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 RUFY4Q6ZNE9 571 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 CARFQ8N187 725 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 BDH2Q9BUT1 245 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 PALD1Q9ULE6 856 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 BACE2Q9Y5Z0 518 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 HCFC2Q9Y5Z7 792 aa6.53□□□□□ -1.36
ATXN3-233ENST00000555816 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 K7ESM1 405 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 PRICKLE3O43900 615 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 TACR1P25103 407 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 RACK1P63244 317 aaKnown RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 AMPD2Q01433 879 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 CACNB2Q08289 660 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 GRM1Q13255 1194 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 PPP2R5DQ14738 602 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 NT5DC1Q5TFE4 455 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 CLEC4GQ6UXB4 293 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 TTLL7Q6ZT98 887 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 ADAT2Q7Z6V5 191 aaKnown RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-233ENST00000555816 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 PANK3Q9H999 370 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 NTMQ9P121 344 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 MYRFQ9Y2G1 1151 aa6.52□□□□□ -1.37
ATXN3-233ENST00000555816 RNF123Q5XPI4 1314 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 SBF1O95248 1867 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
ATXN3-233ENST00000555816 NOBOXO60393 691 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 A1BGP04217 495 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 DLX2Q07687 328 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-233ENST00000555816 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
ATXN3-233ENST00000555816 CST9Q5W186 159 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 ZNF790Q6PG37 636 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-233ENST00000555816 GGNQ86UU5 652 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 CRACR2BQ8N4Y2 399 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-233ENST00000555816 RASGRP4Q8TDF6 673 aa6.51□□□□□ -1.37
ATXN3-233ENST00000555816 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-233ENST00000555816 MTA3Q9BTC8 594 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms