RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	ZNF652	Q9Y2D9	606 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	FZD9	O00144	591 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	FOXD2	O60548	495 aa	Predicted RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	MT-CO1	P00395	513 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	CFB	P00751	764 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	ATF2	P15336	505 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	PTPN1	P18031	435 aa	Known RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	MC3R	P41968	323 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	LIMS1	P48059	325 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	TUSC3	Q13454	348 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	TMEM132B	Q14DG7	1078 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	ESRP1	Q6NXG1	681 aa	Known RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	TRIM48	Q8IWZ4	208 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	RBM12B	Q8IXT5	1001 aa	Known RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	MYO1H	Q8N1T3	1032 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	DACT3	Q96B18	629 aa	Predicted RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	ZMAT4	Q9H898	229 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	ASH2L	Q9UBL3	628 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	ZNF180	Q9UJW8	692 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	NOC2L	Q9Y3T9	749 aa	Known RBP	5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	TELO2	Q9Y4R8	837 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	PCDHB4	Q9Y5E5	795 aa		5.8	□□□□□ -1.48
KTN1-222	ENST00000555506	FAM90A27P	A6NNH2	459 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	RFXAP	O00287	272 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	SGSM2	O43147	1006 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	PRC1	O43663	620 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	ASGR2	P07307	311 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	SYN1	P17600	705 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	CCND1	P24385	295 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	CD40	P25942	277 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	SDHA	P31040	664 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	FNTB	P49356	437 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	SCAND1	P57086	179 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	KRT85	P78386	507 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	BTBD8	Q5XKL5	378 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	FRMD7	Q6ZUT3	714 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	ALG3	Q92685	438 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	TSPAN17	Q96FV3	270 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	PEX11G	Q96HA9	241 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	FAXDC2	Q96IV6	333 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	RHOBTB2	Q9BYZ6	727 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	ZDHHC5	Q9C0B5	715 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	LUC7L	Q9NQ29	371 aa	Known RBP	5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	NUDT5	Q9UKK9	219 aa		5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	LUC7L2	Q9Y383	392 aa	Known RBP	5.79	□□□□□ -1.48
KTN1-222	ENST00000555506	CCDC194	A0A1B0GVG4	234 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	KIF3B	O15066	747 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	KDM1A	O60341	852 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	RFPL1	O75677	317 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	SNUPN	O95149	360 aa	Known RBP	5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	LTF	P02788	710 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	C4BPA	P04003	597 aa	Known RBP	5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	RBP3	P10745	1247 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	ZSCAN20	P17040	1043 aa	Predicted RBP	5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	NXN	Q6DKJ4	435 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	CNKSR3	Q6P9H4	555 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	PGM2L1	Q6PCE3	622 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	MILR1	Q7Z6M3	343 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	CMIP	Q8IY22	773 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	LMBR1	Q8WVP7	490 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	JPH3	Q8WXH2	748 aa	Predicted RBP	5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	CLEC4D	Q8WXI8	215 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	C16orf92	Q96LL3	132 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	C20orf173	Q96LM9	149 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	PCGF6	Q9BYE7	350 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	MS4A5	Q9H3V2	200 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	TCF7L1	Q9HCS4	588 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	RIC8B	Q9NVN3	520 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	GABBR1	Q9UBS5	961 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	PALD1	Q9ULE6	856 aa		5.78	□□□□□ -1.48
KTN1-222	ENST00000555506	TCRBV5S2	A0A599	114 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	TRIM75P	A6NK02	468 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	GOLGA8A	A7E2F4	631 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	GOLGA8B	A8MQT2	603 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	NCAM1	P13591	858 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	PFKL	P17858	780 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	RECQL	P46063	649 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	GPR3	P46089	330 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	AFF3	P51826	1226 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	EPHA7	Q15375	998 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	TARBP2	Q15633	366 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	VMAC	Q2NL98	169 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	CATSPERE	Q5SY80	951 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	FAM102B	Q5T8I3	360 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	TCERG1L	Q5VWI1	586 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	PNMA8A	Q86V59	439 aa	Predicted RBP	5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	NME9	Q86XW9	330 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	AMOTL1	Q8IY63	956 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	TCEAL8	Q8IYN2	117 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	MKS1	Q9NXB0	559 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	USP36	Q9P275	1121 aa	Known RBP	5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	IP6K2	Q9UHH9	426 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	MRFAP1	Q9Y605	127 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	PRAMEF25	A6NGN4	478 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	RASSF10	A6NK89	507 aa		5.77	□□□□□ -1.49
KTN1-222	ENST00000555506	ZBTB7A	O95365	584 aa		5.77	□□□□□ -1.49

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