RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SERPING1P05155 500 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 EIF2AK2P19525 551 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 MAGEA1P43355 309 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 MAPK7Q13164 816 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 BMS1Q14692 1282 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 TDRD12Q587J7 1177 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 DCAF17Q5H9S7 520 aaPredicted RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 DAW1Q8N136 415 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 ZKSCAN4Q969J2 545 aaPredicted RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 PNKPQ96T60 521 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 NUCKS1Q9H1E3 243 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 PCDHB13Q9Y5F0 798 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 USO1O60763 962 aaKnown RBP26.66■■□□□ 1.86
TMEM260-207ENST00000555497 MOCS3O95396 460 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 XRCC5P13010 732 aaKnown RBP26.66■■□□□ 1.86
TMEM260-207ENST00000555497 RPL13P26373 211 aaKnown RBP26.66■■□□□ 1.86
TMEM260-207ENST00000555497 SLC9C1Q4G0N8 1177 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 SLC35C1Q96A29 364 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 JADE2Q9NQC1 790 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 DOCK1Q14185 1865 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 SLC16A3O15427 465 aaKnown RBP26.66■■□□□ 1.86
TMEM260-207ENST00000555497 RAPGEF1Q13905 1077 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 ODF2LQ9ULJ1 636 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 ZNF541Q9H0D2 1346 aa26.66■■□□□ 1.86
TMEM260-207ENST00000555497 RBAK-RBAKDNI3L0D1 243 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 PON1P27169 355 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 ARID5AQ03989 594 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 UTP14CQ5TAP6 766 aaKnown RBP26.65■■□□□ 1.86
TMEM260-207ENST00000555497 KRT222Q8N1A0 295 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 ANKRD13CQ8N6S4 541 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 MSANTD4Q8NCY6 345 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 ATG4CQ96DT6 458 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 MMS19Q96T76 1030 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 PRDM10Q9NQV6 1147 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 AIPL1Q9NZN9 384 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 LTBP3Q9NS15 1303 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 ARHGEF35A5YM69 484 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 PJA2O43164 708 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 HIP1RO75146 1068 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 EPB41P11171 864 aaKnown RBP26.65■■□□□ 1.86
TMEM260-207ENST00000555497 GUCY2CP25092 1073 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 PGM5Q15124 567 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 ODR4Q5SWX8 454 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 FAM178BQ8IXR5 827 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 FAM133AQ8N9E0 248 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 KCND2Q9NZV8 630 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 SEL1LQ9UBV2 794 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 RIPK3Q9Y572 518 aa26.65■■□□□ 1.86
TMEM260-207ENST00000555497 VWA5AO00534 786 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 ZNF185O15231 689 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 RHOXF2BP0C7M4 288 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 TCERG1LQ5VWI1 586 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 TRERF1Q96PN7 1200 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 RHOXF2Q9BQY4 288 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 METTL14Q9HCE5 456 aaKnown RBP26.64■■□□□ 1.86
TMEM260-207ENST00000555497 PLCB1Q9NQ66 1216 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 ZHX2Q9Y6X8 837 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 LOXHD1Q8IVV2 1947 aa26.64■■□□□ 1.86
TMEM260-207ENST00000555497 ANO9A1A5B4 782 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 DMTNQ08495 405 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 MTMR1Q13613 665 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 KLHDC7AQ5VTJ3 777 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 NEK9Q8TD19 979 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 CAPZA3Q96KX2 299 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 ZNF112Q9UJU3 913 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 ZBED4O75132 1171 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 SASH3O75995 380 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 TBC1D8O95759 1140 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 P4HBP07237 508 aaKnown RBP26.63■■□□□ 1.85
TMEM260-207ENST00000555497 UCHL3P15374 230 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 BACE1P56817 501 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 ENOX2Q16206 610 aaKnown RBP26.63■■□□□ 1.85
TMEM260-207ENST00000555497 EXOC3L4Q17RC7 722 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 PADI6Q6TGC4 694 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 SCYL3Q8IZE3 742 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 SIX2Q9NPC8 291 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 RLFQ13129 1914 aa26.63■■□□□ 1.85
TMEM260-207ENST00000555497 ATP9AO75110 1047 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 MYCLP12524 364 aaPredicted RBP26.62■■□□□ 1.85
TMEM260-207ENST00000555497 NFIL3Q16649 462 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 MAEAQ7L5Y9 396 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 TRIM58Q8NG06 486 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 SGIP1Q9BQI5 828 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 STRA6Q9BX79 667 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 AJAP1Q9UKB5 411 aaPredicted RBP26.62■■□□□ 1.85
TMEM260-207ENST00000555497 RAB21Q9UL25 225 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 COL11A1P12107 1806 aaPredicted RBP26.62■■□□□ 1.85
TMEM260-207ENST00000555497 PTPRAP18433 802 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 PLA2G4AP47712 749 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 USP14P54578 494 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 ANGEL2Q5VTE6 544 aaKnown RBP26.62■■□□□ 1.85
TMEM260-207ENST00000555497 WRNIP1Q96S55 665 aa26.62■■□□□ 1.85
TMEM260-207ENST00000555497 MAP3K20Q9NYL2 800 aaKnown RBP26.62■■□□□ 1.85
TMEM260-207ENST00000555497 PDE2AO00408 941 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-207ENST00000555497 TACC1O75410 805 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 NSMFQ6X4W1 530 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 RNF207Q6ZRF8 634 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 IRF2BP2Q7Z5L9 587 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 FAM186BQ8IYM0 893 aa26.61■■□□□ 1.85
TMEM260-207ENST00000555497 DRC1Q96MC2 740 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms