RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SMYD4Q8IYR2 804 aaPredicted RBP12□□□□□ -0.49
TDP1-211ENST00000555178 RNF214Q8ND24 703 aa12□□□□□ -0.49
TDP1-211ENST00000555178 KLHDC9Q8NEP7 349 aa12□□□□□ -0.49
TDP1-211ENST00000555178 SPATA20Q8TB22 786 aa12□□□□□ -0.49
TDP1-211ENST00000555178 GLG1Q92896 1179 aa12□□□□□ -0.49
TDP1-211ENST00000555178 HPS3Q969F9 1004 aa12□□□□□ -0.49
TDP1-211ENST00000555178 DEFB118Q96PH6 123 aa12□□□□□ -0.49
TDP1-211ENST00000555178 DNAJC25Q9H1X3 360 aa12□□□□□ -0.49
TDP1-211ENST00000555178 CUEDC2Q9H467 287 aa12□□□□□ -0.49
TDP1-211ENST00000555178 KLRC4O43908 158 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 SARSP49591 514 aaKnown RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 RARRES1P49788 294 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 KCNA10Q16322 511 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 ANO6Q4KMQ2 910 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 FBXO46Q6PJ61 603 aaPredicted RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 C4orf19Q8IY42 314 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 ELOA2Q8IYF1 753 aaPredicted RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 RDM1Q8NG50 284 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 SMARCE1Q969G3 411 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 TSPY26PQ9H489 355 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 PAK6Q9NQU5 681 aaPredicted RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 DNM3Q9UQ16 869 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 EMSYQ7Z589 1322 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 SFI1A8K8P3 1242 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 PPFIA4O75335 1185 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 EYA4O95677 639 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 CYP11B2P19099 503 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 ASIC1P78348 528 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 ZNF200P98182 395 aaPredicted RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 PURAQ00577 322 aaKnown RBP11.99□□□□□ -0.49
TDP1-211ENST00000555178 DRP2Q13474 957 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 LRRC41Q15345 812 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 GPBP1Q86WP2 473 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 DDX12PQ92771 950 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 DNAJC19Q96DA6 116 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 ZNF333Q96JL9 665 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 RBSNQ9H1K0 784 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 GPRC5CQ9NQ84 441 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 GRIN2DO15399 1336 aa11.99□□□□□ -0.49
TDP1-211ENST00000555178 H3BRB1 525 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 LYPLA2O95372 231 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 OATP04181 439 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 RPN1P04843 607 aaKnown RBP11.98□□□□□ -0.49
TDP1-211ENST00000555178 CCDC192P0DO97 292 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 GSE1Q14687 1217 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 DGKDQ16760 1214 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 XKR9Q5GH70 373 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 NT5DC1Q5TFE4 455 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 RINT1Q6NUQ1 792 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 SYT2Q8N9I0 419 aaPredicted RBP11.98□□□□□ -0.49
TDP1-211ENST00000555178 GLIS3Q8NEA6 775 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 NEK9Q8TD19 979 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 NACC1Q96RE7 527 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 FGFBP2Q9BYJ0 223 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 TUT1Q9H6E5 874 aaKnown RBP11.98□□□□□ -0.49
TDP1-211ENST00000555178 MAGEF1Q9HAY2 307 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
TDP1-211ENST00000555178 Q9Y3F1 56 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 ASGR1P07306 291 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 IGBP1P78318 339 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 TARBP2Q15633 366 aaKnown RBP11.98□□□□□ -0.49
TDP1-211ENST00000555178 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 C1orf186Q6ZWK4 172 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 PLPPR4Q7Z2D5 763 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 DAW1Q8N136 415 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 C7orf25Q9BPX7 421 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 MCOLN1Q9GZU1 580 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 XPNPEP1Q9NQW7 623 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 GDAQ9Y2T3 454 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
TDP1-211ENST00000555178 SLC26A4O43511 780 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 USO1O60763 962 aaKnown RBP11.97□□□□□ -0.49
TDP1-211ENST00000555178 F2P00734 622 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 GJB1P08034 283 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 INSRRP14616 1297 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
TDP1-211ENST00000555178 NKX3-2P78367 333 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 MAPK7Q13164 816 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
TDP1-211ENST00000555178 MORC3Q14149 939 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 STX1AQ16623 288 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 KIAA0753Q2KHM9 967 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 MARCH8Q5T0T0 291 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 REEP2Q9BRK0 252 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 SMARCAD1Q9H4L7 1026 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 AZI2Q9H6S1 392 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 SETD4Q9NVD3 440 aa11.97□□□□□ -0.49
TDP1-211ENST00000555178 HAS3O00219 553 aa11.96□□□□□ -0.49
TDP1-211ENST00000555178 SMC2O95347 1197 aa11.96□□□□□ -0.49
TDP1-211ENST00000555178 IDEP14735 1019 aa11.96□□□□□ -0.49
TDP1-211ENST00000555178 PSEN2P49810 448 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms