RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.36□□□□□ -1.235e-6■■■□□ 16.3
SYNE2-216ENST00000555002 MAP4P27816 1152 aaKnown RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 LBHD1Q9BQE6 289 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 CAB39Q9Y376 341 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 DENND4BO75064 1496 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 HOXA13P31271 388 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SLC27A3Q5K4L6 730 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 FAM26FQ5R3K3 315 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 E4F1Q66K89 784 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 G2E3Q7L622 706 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 KIAA2013Q8IYS2 634 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 TRIM8Q9BZR9 551 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 CACNA2D2Q9NY47 1150 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 USE1Q9NZ43 259 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 DCTN3O75935 186 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 GSNP06396 782 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 GAP43P17677 238 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 CA4P22748 312 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 KRT72Q14CN4 511 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 MORF4L2Q15014 288 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SYDE2Q5VT97 1194 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 MAGEB10Q96LZ2 347 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SAYSD1Q9NPB0 183 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 FANCAO15360 1455 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 MYO1GB0I1T2 1018 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 EPB42P16452 691 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 AKT1P31749 480 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 AP1B1Q10567 949 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 C1orf146Q5VVC0 180 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 DNAJC10Q8IXB1 793 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 FAM133AQ8N9E0 248 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 APPL2Q8NEU8 664 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 WDR47O94967 919 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 ADORA2BP29275 332 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 USP14P54578 494 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 TRIML2Q8N7C3 387 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 ATXN7L3BQ96GX2 97 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 PAPOLBQ9NRJ5 636 aaKnown RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 TNNQ9UQP3 1299 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SNX14Q9Y5W7 946 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 SOS2Q07890 1332 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 FOSP01100 380 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 TTC17Q96AE7 1141 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 AP1M1Q9BXS5 423 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 MID2Q9UJV3 735 aa7.36□□□□□ -1.23
SYNE2-216ENST00000555002 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.36□□□□□ -1.23
SYNE2-216ENST00000555002 MAP3K15Q6ZN16 1313 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 EIF2AK4Q9P2K8 1649 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 HOXC9P31274 260 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 CLCN1P35523 988 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 PTPN21Q16825 1174 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 INTS4Q96HW7 963 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 JPH2Q9BR39 696 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 STK17AQ9UEE5 414 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 FTCDO95954 541 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 RFX3P48380 749 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 NLRP9Q7RTR0 991 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 NUP93Q8N1F7 819 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 FBXO18Q8NFZ0 1043 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 PNMA3Q9UL41 463 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 HEY1Q9Y5J3 304 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 PRR23AA6NEV1 266 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 TRPC1P48995 793 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 STAT2P52630 851 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 LRRC74AQ0VAA2 488 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 SMARCAD1Q9H4L7 1026 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 RSPH10B2B2RC85 870 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 PDHA1P08559 390 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 RSPH10BP0C881 870 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 COPB1P53618 953 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 NFX1Q12986 1120 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 NME3Q13232 169 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 TTC23LQ6PF05 361 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 ARHGAP18Q8N392 663 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 TBC1D19Q8N5T2 526 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 UTP6Q9NYH9 597 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 CTTNQ14247 550 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 SLC10A5Q5PT55 438 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 LRRC8EQ6NSJ5 796 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 PDXDC2PQ6P474 469 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 ZNF790Q6PG37 636 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 SCG3Q8WXD2 468 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 EPB41L5Q9HCM4 733 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 COPRSQ9NQ92 184 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 CCDC151A5D8V7 595 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 MOCS2O96007 188 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 PSMC2P35998 433 aaKnown RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 AARSP49588 968 aaKnown RBP eCLIP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 KDELC2Q7Z4H8 507 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 CNKSR1Q969H4 720 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 DBNDD1Q9H9R9 158 aa7.35□□□□□ -1.23
SYNE2-216ENST00000555002 UBA6A0AVT1 1052 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 SSTR3P32745 418 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-216ENST00000555002 SMYD4Q8IYR2 804 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms