RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 C16orf59Q7L2K0 433 aa27.14■■□□□ 1.94
SDR39U1-209ENST00000554947 IGSF22Q8N9C0 903 aa27.14■■□□□ 1.94
SDR39U1-209ENST00000554947 POLR3CQ9BUI4 534 aaPredicted RBP27.14■■□□□ 1.94
SDR39U1-209ENST00000554947 SEPT9Q9UHD8 586 aaPredicted RBP27.14■■□□□ 1.94
SDR39U1-209ENST00000554947 DDX11L8A8MPP1 907 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 TMEM240Q5SV17 173 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 DTHD1Q6ZMT9 781 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 ANO5Q75V66 913 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 OTUD6AQ7L8S5 288 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 TRMT1LQ7Z2T5 733 aaKnown RBP27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 DNAJB3Q8WWF6 145 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 VWCEQ96DN2 955 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 CEP89Q96ST8 783 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 WRAP73Q9P2S5 460 aaPredicted RBP27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 SIP14410 1827 aa27.13■■□□□ 1.93
SDR39U1-209ENST00000554947 XRCC6P12956 609 aaKnown RBP eCLIP27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 CYP4A11Q02928 519 aa27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 CTTNQ14247 550 aaKnown RBP27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 HAUS3Q68CZ6 603 aa27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 TPH2Q8IWU9 490 aa27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 EXOC8Q8IYI6 725 aa27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 ZNF710Q8N1W2 664 aa27.12■■□□□ 1.93
SDR39U1-209ENST00000554947 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.12■■□□□ 1.931e-10■□□□□ 10
SDR39U1-209ENST00000554947 FGBP02675 491 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 RPA1P27694 616 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 TMOD1P28289 359 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 YWHABP31946 246 aaKnown RBP27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 MGAT3Q09327 533 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 TBC1D8BQ0IIM8 1120 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 GPNMBQ14956 572 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 SHHQ15465 462 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 IER5Q5VY09 327 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 ZNF365Q70YC5 407 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 KIAA0319LQ8IZA0 1049 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 LINC01465Q8N7H1 131 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 JPH2Q9BR39 696 aaPredicted RBP27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 ANKEF1Q9NU02 776 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 LRWD1Q9UFC0 647 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 KDM3AQ9Y4C1 1321 aa27.11■■□□□ 1.93
SDR39U1-209ENST00000554947 NBNO60934 754 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 SPATA31C1P0DKV0 1188 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 ACRP10323 421 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 MRPS6P82932 125 aaKnown RBP27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 MBTPS1Q14703 1052 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 MTERF2Q49AM1 385 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 SPRYD3Q8NCJ5 442 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 HERVK_113Q902F9 699 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 ZBTB10Q96DT7 871 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 FAM49AQ9H0Q0 323 aaPredicted RBP27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 MTIF3Q9H2K0 278 aaKnown RBP27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 CYP26B1Q9NR63 512 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 SQORQ9Y6N5 450 aa27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 MORC2Q9Y6X9 1032 aaPredicted RBP27.1■■□□□ 1.93
SDR39U1-209ENST00000554947 IGKV6-21A0A0C4DH24 114 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 M0QZ92 97 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 CHRNA1P02708 482 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 ZSCAN22P10073 491 aaPredicted RBP27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 ACTN1P12814 892 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 SF3A1Q15459 793 aaKnown RBP27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 IL17AQ16552 155 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 HABP4Q5JVS0 413 aaKnown RBP27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 C9orf50Q5SZB4 431 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 RASIP1Q5U651 963 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 EFCAB12Q6NXP0 572 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 DEFB128Q7Z7B8 93 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 CATSPER3Q86XQ3 398 aa27.09■■□□□ 1.93
SDR39U1-209ENST00000554947 MAFO75444 373 aaPredicted RBP27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 CTSHP09668 335 aa27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 LRIT3Q3SXY7 679 aa27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 METTL13Q8N6R0 699 aa27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 CEP170P1Q96L14 293 aa27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 TRPV2Q9Y5S1 764 aa27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 CDY2AQ9Y6F7 541 aa27.08■■□□□ 1.93
SDR39U1-209ENST00000554947 TMEM150BA6NC51 233 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 MED24O75448 989 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 RFC5P40937 340 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 PLA2G4FQ68DD2 849 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 CNKSR3Q6P9H4 555 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 FAM43BQ6ZT52 329 aaPredicted RBP27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 RNPC3Q96LT9 517 aaKnown RBP27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 AK8Q96MA6 479 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 NACC1Q96RE7 527 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 MAP7D2Q96T17 732 aa27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 FTOQ9C0B1 505 aaKnown RBP eCLIP27.07■■□□□ 1.92
SDR39U1-209ENST00000554947 MICAL3Q7RTP6 2002 aa27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 GAS2O43903 313 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 BAIAP3O94812 1187 aa27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 F13A1P00488 732 aa27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 NPEPPSP55786 919 aa27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 CDC42EP1Q00587 391 aa27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 USP38Q8NB14 1042 aa27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 CELF4Q9BZC1 486 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 DHX33Q9H6R0 707 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 DBR1Q9UK59 544 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-209ENST00000554947 SLC26A4O43511 780 aa27.05■■□□□ 1.92
SDR39U1-209ENST00000554947 CCT6AP40227 531 aaKnown RBP27.05■■□□□ 1.92
SDR39U1-209ENST00000554947 DNM2P50570 870 aa27.05■■□□□ 1.92
SDR39U1-209ENST00000554947 PTPAQ15257 358 aa27.05■■□□□ 1.92
SDR39U1-209ENST00000554947 PLEKHG4Q58EX7 1191 aa27.05■■□□□ 1.92
SDR39U1-209ENST00000554947 XKR9Q5GH70 373 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms