RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 EMBQ6PCB8 327 aa13.84□□□□□ -0.19
PPP4R3A-206ENST00000554943 KIAA0825Q8IV33 1275 aa13.84□□□□□ -0.19
PPP4R3A-206ENST00000554943 HES6Q96HZ4 224 aa13.84□□□□□ -0.19
PPP4R3A-206ENST00000554943 METTL14Q9HCE5 456 aaKnown RBP13.84□□□□□ -0.19
PPP4R3A-206ENST00000554943 STIM2Q9P246 746 aa13.84□□□□□ -0.19
PPP4R3A-206ENST00000554943 DNM3Q9UQ16 869 aa13.84□□□□□ -0.19
PPP4R3A-206ENST00000554943 GYS2P54840 703 aa13.83□□□□□ -0.19
PPP4R3A-206ENST00000554943 POLR2FP61218 127 aaKnown RBP13.83□□□□□ -0.19
PPP4R3A-206ENST00000554943 MAP9Q49MG5 647 aa13.83□□□□□ -0.19
PPP4R3A-206ENST00000554943 CLEC4DQ8WXI8 215 aa13.83□□□□□ -0.19
PPP4R3A-206ENST00000554943 NCK2O43639 380 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 PALMO75781 387 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 GH2P01242 217 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 TAL1P17542 331 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 ACTN2P35609 894 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 SKOR1P84550 965 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 CETN3O15182 167 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 ECE1P42892 770 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 CASP4P49662 377 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 TSEN2Q8NCE0 465 aaKnown RBP13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 LNX1Q8TBB1 728 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 ALS2CR12Q96Q35 445 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 TXLNGYQ9BZA5 131 aa13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 BMP2KQ9NSY1 1161 aaPredicted RBP13.83□□□□□ -0.2
PPP4R3A-206ENST00000554943 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 H0YGN5 161 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 DDX3XO00571 662 aaKnown RBP eCLIP13.82□□□□□ -0.23e-6■■■□□ 14.8
PPP4R3A-206ENST00000554943 ACTN1P12814 892 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 KIF22Q14807 665 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 LRRC31Q6UY01 552 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 FAM83AQ86UY5 434 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 TDRD3Q9H7E2 651 aaKnown RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 NFS1Q9Y697 457 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 GDF11O95390 407 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 GLI1P08151 1106 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 ENPEPQ07075 957 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 AOC3Q16853 763 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 TBC1D5Q92609 795 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 CALR3Q96L12 384 aaKnown RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 ZBTB21Q9ULJ3 1066 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 MPHOSPH10O00566 681 aaKnown RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 POLR3GO15318 223 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 STAT2P52630 851 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 EPHB4P54760 987 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 RIT2Q99578 217 aa13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 DBR1Q9UK59 544 aaKnown RBP13.82□□□□□ -0.2
PPP4R3A-206ENST00000554943 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 RNF40O75150 1001 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 GGCXP38435 758 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 PRELPP51888 382 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 SNAP25P60880 206 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 SETQ01105 290 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 SLC20A2Q08357 652 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 TCP10Q12799 353 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 ALS2CLQ60I27 953 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 TPCN2Q8NHX9 752 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 UNC45AQ9H3U1 944 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 F8VZ95 297 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 ACER1Q8TDN7 264 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 CAPZA3Q96KX2 299 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 SUCLA2Q9P2R7 463 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 ZNF70Q9UC06 446 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 RABGAP1Q9Y3P9 1069 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 UBIAD1Q9Y5Z9 338 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 OTOFQ9HC10 1997 aa13.81□□□□□ -0.2
PPP4R3A-206ENST00000554943 TRAF1Q13077 416 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 MEX3CQ5U5Q3 659 aaKnown RBP13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 FAM133AQ8N9E0 248 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 NEK9Q8TD19 979 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 SMARCAL1Q9NZC9 954 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 DDX3YO15523 660 aaKnown RBP13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 AKR1B10O60218 316 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 TTMPQ5BVD1 217 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 NT5DC3Q86UY8 548 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 RGL1Q9NZL6 768 aa13.8□□□□□ -0.2
PPP4R3A-206ENST00000554943 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms