RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CLCN6P51797 869 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 ERCC6LQ2NKX8 1250 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
SRP54-205ENST00000554803 CCDC178Q5BJE1 867 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
SRP54-205ENST00000554803 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
SRP54-205ENST00000554803 CATIPQ7Z7H3 387 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 TMTC1Q8IUR5 882 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 TXLNBQ8N3L3 684 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 TC2NQ8N9U0 490 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 PRSS33Q8NF86 280 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 PHKBQ93100 1093 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 FGD4Q96M96 766 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 ARID3AQ99856 593 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 TMEM47Q9BQJ4 181 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 ARFGAP3Q9NP61 516 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 MRFAP1Q9Y605 127 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 ATG2AQ2TAZ0 1938 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 DMDP11532 3685 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 PLXNA3P51805 1871 aa12.38□□□□□ -0.43
SRP54-205ENST00000554803 LRRC10BA6NIK2 292 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 BTBD18B2RXH4 712 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
SRP54-205ENST00000554803 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
SRP54-205ENST00000554803 RFC2P35250 354 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 TOB1P50616 345 aaPredicted RBP12.37□□□□□ -0.43
SRP54-205ENST00000554803 PTPN5P54829 565 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 ICA1Q05084 483 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 CDKAL1Q5VV42 579 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 ARMCX2Q7L311 632 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 RSRC2Q7L4I2 434 aaKnown RBP12.37□□□□□ -0.43
SRP54-205ENST00000554803 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 LRRC47Q8N1G4 583 aaKnown RBP12.37□□□□□ -0.43
SRP54-205ENST00000554803 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 ACBD3Q9H3P7 528 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 KAT14Q9H8E8 782 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 MAGEF1Q9HAY2 307 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 FHOD1Q9Y613 1164 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 NLRC5Q86WI3 1866 aa12.37□□□□□ -0.43
SRP54-205ENST00000554803 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 PPFIA3O75145 1194 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 EIF3JO75822 258 aaKnown RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 CALML3P27482 149 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 TXLNAP40222 546 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 PBX1P40424 430 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 GNG11P61952 73 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 TNFAIP2Q03169 654 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 FSCN1Q16658 493 aaKnown RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 GALNT17Q6IS24 598 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 IQUBQ8NA54 791 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 NOC3LQ8WTT2 800 aaKnown RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 ERCC4Q92889 916 aaPredicted RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
SRP54-205ENST00000554803 LCTP09848 1927 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 DCHS1Q96JQ0 3298 aa12.36□□□□□ -0.43
SRP54-205ENST00000554803 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 LCHNA4D1U4 455 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 LAD1O00515 517 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 ZEB2O60315 1214 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 TTLL1O95922 423 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 CYP2C9P11712 490 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 PSMC6P62333 389 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 ZP2Q05996 745 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 TROAPQ12815 778 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 CUL4BQ13620 913 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 SRGAP1Q7Z6B7 1085 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 EHBP1Q8NDI1 1231 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 NEK9Q8TD19 979 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 AIFM3Q96NN9 605 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 CUEDC2Q9H467 287 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 NYAP2Q9P242 653 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
SRP54-205ENST00000554803 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 LIMA1Q9UHB6 759 aaKnown RBP12.35□□□□□ -0.43
SRP54-205ENST00000554803 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
SRP54-205ENST00000554803 MFAP3LO75121 409 aa12.34□□□□□ -0.43
SRP54-205ENST00000554803 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms