RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 S100BP04271 92 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 TBC1D10BQ4KMP7 808 aaPredicted RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 FGD4Q96M96 766 aa14.98□□□□□ -0.01
VTI1B-204ENST00000554659 ZMAT2Q96NC0 199 aaKnown RBP14.98□□□□□ -0.01
VTI1B-204ENST00000554659 EEF1DP29692 281 aaKnown RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 PPP2R2AP63151 447 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 CTTNQ14247 550 aaKnown RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 PCGF5Q86SE9 256 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 ABL1P00519 1130 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 NR3C1P04150 777 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 PSAPP07602 524 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 IGBP1P78318 339 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 GPC5P78333 572 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 KIF22Q14807 665 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 RBM41Q96IZ5 413 aaKnown RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 REREQ9P2R6 1566 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TTC26A0AVF1 554 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 FAM83BQ5T0W9 1011 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TBC1D9BQ66K14 1250 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 SHC4Q6S5L8 630 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 SYT2Q8N9I0 419 aaPredicted RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TRIM55Q9BYV6 548 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TMEM60Q9H2L4 133 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 ADD3Q9UEY8 706 aaKnown RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 WDR91A4D1P6 747 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 ZNF233A6NK53 670 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TEX33O43247 280 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 KRT37O76014 449 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 APBA3O96018 575 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 CDC27P30260 824 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TSTA3Q13630 321 aaPredicted RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 NAA30Q147X3 362 aaPredicted RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 HP1BP3Q5SSJ5 553 aaPredicted RBP14.97□□□□□ -0.01
VTI1B-204ENST00000554659 SLFN12LQ6IEE8 588 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 MAML1Q92585 1016 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 CHMP6Q96FZ7 201 aa14.97□□□□□ -0.01
VTI1B-204ENST00000554659 TMEM94Q12767 1356 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 ANKRD65E5RJM6 399 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 SUSD4Q5VX71 490 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 KRT39Q6A163 491 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 NFRKBQ6P4R8 1299 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 GADL1Q6ZQY3 521 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 SGMS1Q86VZ5 419 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 ENAHQ8N8S7 591 aaPredicted RBP14.96□□□□□ -0.01
VTI1B-204ENST00000554659 RNF169Q8NCN4 708 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 DEPDC1BQ8WUY9 529 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 DCAF4Q8WV16 495 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 CFAP36Q96G28 342 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 TTC25Q96NG3 672 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 SAYSD1Q9NPB0 183 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 G3BP2Q9UN86 482 aaKnown RBP14.96□□□□□ -0.01
VTI1B-204ENST00000554659 TADA3O75528 432 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 ZBED1O96006 694 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 PMS2P54278 862 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 ARL4CP56559 192 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 MAGOHP61326 146 aaKnown RBP14.96□□□□□ -0.01
VTI1B-204ENST00000554659 COASYQ13057 564 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 OR6B2Q6IFH4 312 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.96□□□□□ -0.015e-7■□□□□ 10.6
VTI1B-204ENST00000554659 SNX25Q9H3E2 840 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 TAF1DQ9H5J8 278 aaPredicted RBP14.96□□□□□ -0.01
VTI1B-204ENST00000554659 IQGAP3Q86VI3 1631 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 KCTD2Q14681 263 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 GSPT2Q8IYD1 628 aaKnown RBP14.96□□□□□ -0.01
VTI1B-204ENST00000554659 COG1Q8WTW3 980 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 ATP6V1E2Q96A05 226 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 TSC22D3Q99576 134 aa14.96□□□□□ -0.01
VTI1B-204ENST00000554659 NXF1Q9UBU9 619 aaKnown RBP14.96□□□□□ -0.01
VTI1B-204ENST00000554659 CFLARO15519 480 aa14.96□□□□□ -0.02
VTI1B-204ENST00000554659 ATICP31939 592 aa14.96□□□□□ -0.02
VTI1B-204ENST00000554659 SLC12A1Q13621 1099 aa14.96□□□□□ -0.02
VTI1B-204ENST00000554659 ATP6V1G3Q96LB4 118 aa14.96□□□□□ -0.02
VTI1B-204ENST00000554659 EIF2AQ9BY44 585 aaKnown RBP14.96□□□□□ -0.02
VTI1B-204ENST00000554659 FIS1Q9Y3D6 152 aa14.96□□□□□ -0.02
VTI1B-204ENST00000554659 POTEMA6NI47 508 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 SERPINB2P05120 415 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 GRAPQ13588 217 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 GRAMD1BQ3KR37 738 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 SFR1Q86XK3 245 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CRLF3Q8IUI8 442 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 GUF1Q8N442 669 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CNOT8Q9UFF9 292 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 RASA4BC9J798 803 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ZBTB5O15062 677 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 RASA4O43374 803 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 HSPA8P11142 646 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 TRMT10CQ7L0Y3 403 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 NLRP14Q86W24 1093 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 FOXP4Q8IVH2 680 aaPredicted RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 TRIML2Q8N7C3 387 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CCDC124Q96CT7 223 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 EDEM3Q9BZQ6 932 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms