RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 KLK7P49862 253 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 USP14P54578 494 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 HERVK_113P62684 666 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PIP4K2BP78356 416 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SLC7A5Q01650 507 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CLCQ05315 142 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 STIM1Q13586 685 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SEPT6Q14141 434 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF174Q15697 407 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CHRNA2Q15822 529 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 WHAMMP3Q1A5X7 153 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TAF7LQ5H9L4 462 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 WDR93Q6P2C0 686 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CTR9Q6PD62 1173 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CPLX2Q6PUV4 134 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TRAPPC11Q7Z392 1133 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TADA2BQ86TJ2 420 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC84Q86UT8 332 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 LSRQ86X29 649 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CNGA4Q8IV77 575 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TMEM102Q8N9M5 508 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 RBBP8NLQ8NC74 664 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC148Q8NFR7 591 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SMCR8Q8TEV9 937 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ACDQ96AP0 544 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PSMB7Q99436 277 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SELENOOQ9BVL4 669 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NAA15Q9BXJ9 866 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 LACRTQ9GZZ8 138 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 IRF2BPLQ9H1B7 796 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 DDX56Q9NY93 547 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ZNRF3Q9ULT6 936 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PPME1Q9Y570 386 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TJP1Q07157 1748 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SCN11AQ9UI33 1791 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MST1RQ04912 1400 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ZBTB42B2RXF5 422 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NKRFO15226 690 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CIAO1O76071 339 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NDUFA10O95299 355 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ZFYP08048 801 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PHKA1P46020 1223 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 AARSP49588 968 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 IRAK1P51617 712 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 COPB1P53618 953 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PMS1P54277 932 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 EIF6P56537 245 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CABP4P57796 275 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CYP27A1Q02318 531 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 UBXN1Q04323 297 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TNP2Q05952 138 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TCIRG1Q13488 830 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MPP2Q14168 576 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SAFBQ15424 915 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 FILIP1LQ4L180 1135 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 C2orf27AQ580R0 203 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 METTL24Q5JXM2 366 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC122Q5T0U0 273 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 RRAGBQ5VZM2 374 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 KCNV1Q6PIU1 500 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 WDR59Q6PJI9 974 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CYP26C1Q6V0L0 522 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NCAPG2Q86XI2 1143 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TMTC1Q8IUR5 882 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 EFCAB13Q8IY85 973 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CRACR2BQ8N4Y2 399 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TRIML1Q8N9V2 468 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 STK35Q8TDR2 534 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 COG1Q8WTW3 980 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 SMARCC1Q92922 1105 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GAL3ST3Q96A11 431 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MUC3BQ9H195 1237 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ARMT1Q9H993 441 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MED4Q9NPJ6 270 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GNL3LQ9NVN8 582 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ACTR10Q9NZ32 417 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 EHD2Q9NZN4 543 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GDAQ9Y2T3 454 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 EPN1Q9Y6I3 576 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 FAM169AQ9Y6X4 670 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 XDHP47989 1333 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PKD1L3Q7Z443 1732 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MYH6P13533 1939 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TCRBV5S4A2TA0A5A2 114 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MACROD2A1Z1Q3 448 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA6CA6NDK9 693 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 KCNJ18B7U540 433 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MYO1FO00160 1098 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ERLIN2O94905 339 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 MBD4O95243 580 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GJB6O95452 261 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 VIL1P09327 827 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA6DP0CG33 693 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 VEGFAP15692 232 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PDE6AP16499 860 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 IFNAR1P17181 557 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 NFKB1P19838 968 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 POU3F3P20264 500 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 GPTP24298 496 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 HNRNPH1P31943 449 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms