RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 PSAPP07602 524 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 POU3F3P20264 500 aaPredicted RBP11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 IGBP1P78318 339 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 MRPS6P82932 125 aaKnown RBP11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 TAP1Q03518 808 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 Q4G0T1 1027 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 IER5Q5VY09 327 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 PDXDC2PQ6P474 469 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 KRT25Q7Z3Z0 450 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 NME8Q8N427 588 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 USP38Q8NB14 1042 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 DNAJB3Q8WWF6 145 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 WASF1Q92558 559 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 MBOAT7Q96N66 472 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 PCDHA10Q9Y5I2 948 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 MAFBQ9Y5Q3 323 aaPredicted RBP11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 IGSF9BQ9UPX0 1349 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
PTCD2P1-201ENST00000554393 MSH4O15457 936 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 CTDNEP1O95476 244 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 SFNP31947 248 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 JAK3P52333 1124 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 HTRA4P83105 476 aaPredicted RBP11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 ADGRE1Q14246 886 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 LPIN1Q14693 890 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 NONOQ15233 471 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 ZNF484Q5JVG2 852 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 TSHZ1Q6ZSZ6 1077 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 RDM1Q8NG50 284 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 OSBPL7Q9BZF2 842 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 INSL6Q9Y581 213 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
PTCD2P1-201ENST00000554393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 ZBTB42B2RXF5 422 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 M0QZ92 97 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 GAS7O60861 476 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 GHRP10912 638 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 ATP4AP20648 1035 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 NEK4P51957 841 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 ME3Q16798 604 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 LRCH2Q5VUJ6 765 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 TMCO2Q7Z6W1 182 aaPredicted RBP11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 MYOCDQ8IZQ8 938 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 TRAPPC12Q8WVT3 735 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 TOP1MTQ969P6 601 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 TEKT3Q9BXF9 490 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 FAM49AQ9H0Q0 323 aaPredicted RBP11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 TRPV2Q9Y5S1 764 aa11.76□□□□□ -0.53
PTCD2P1-201ENST00000554393 CCDC194A0A1B0GVG4 234 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 LCHNA4D1U4 455 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 LINC01553A4QN01 128 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 PSMD10O75832 226 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 TDP2O95551 362 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 IGFBP4P22692 258 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 KLRC1P26715 233 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 ERVK-21P61565 698 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 PPP4R3AQ6IN85 833 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 B3GNT9Q6UX72 402 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 MAMSTRQ6ZN01 415 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 CKAP2LQ8IYA6 745 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 ETNPPLQ8TBG4 499 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 SAMD11Q96NU1 681 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 TGS1Q96RS0 853 aaKnown RBP11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 NAP1L4Q99733 375 aaKnown RBP11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 FTHL17Q9BXU8 183 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 CELF4Q9BZC1 486 aaKnown RBP11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 GABBR1Q9UBS5 961 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 KCNJ14Q9UNX9 436 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 HCN4Q9Y3Q4 1203 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 SAMM50Q9Y512 469 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 BDP1A6H8Y1 2624 aa11.75□□□□□ -0.53
PTCD2P1-201ENST00000554393 NCOR1O75376 2440 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 MAGEB2O15479 319 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 LARGE1O95461 756 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 C22orf31O95567 290 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 FDPSP14324 419 aaKnown RBP11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 INF2Q27J81 1249 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 NEK8Q86SG6 692 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 NSUN7Q8NE18 718 aaKnown RBP11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 FAM20AQ96MK3 541 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
PTCD2P1-201ENST00000554393 YME1L1Q96TA2 773 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms