RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 MICAL2O94851 1124 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 MYL3P08590 195 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 TARSP26639 723 aaKnown RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 ARSDP51689 593 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 DEFB103AP81534 67 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 PTPN11Q06124 597 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 COL19A1Q14993 1142 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 PTPROQ16827 1216 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 LRRFIP1Q32MZ4 808 aaKnown RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 FAM47CQ5HY64 1035 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 DMRTC2Q8IXT2 367 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 AMOTL1Q8IY63 956 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 TRMT2AQ8IZ69 625 aaKnown RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 EDAQ92838 391 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 PABPC5Q96DU9 382 aaKnown RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 ARMT1Q9H993 441 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 VTA1Q9NP79 307 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 MUTYHQ9UIF7 546 aa8.18□□□□□ -1.1
ATXN3-224ENST00000554040 DDX49Q9Y6V7 483 aaKnown RBP8.18□□□□□ -1.1
ATXN3-224ENST00000554040 TPRP12270 2363 aaKnown RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 ABHD14A-ACY1A0A1B0GW23 586 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 RGS9O75916 674 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 PARNO95453 639 aaKnown RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CXCL10P02778 98 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CPB1P15086 417 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CPT1AP50416 773 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 RARSP54136 660 aaKnown RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 TIGD5Q53EQ6 642 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 TCEAL5Q5H9L2 206 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CNKSR3Q6P9H4 555 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 DHX32Q7L7V1 743 aaKnown RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 KRT25Q7Z3Z0 450 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 FAM35AQ86V20 835 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CAGE1Q8TC20 777 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 MORC4Q8TE76 937 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 AFAP1L1Q8TED9 768 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 MKL1Q969V6 931 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 PBXIP1Q96AQ6 731 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CRBNQ96SW2 442 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 C17orf80Q9BSJ5 609 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 WDR11Q9BZH6 1224 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 FRRS1LQ9P0K9 344 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 CLIP2Q9UDT6 1046 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 INSL6Q9Y581 213 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 MYO5AQ9Y4I1 1855 aaKnown RBP8.17□□□□□ -1.1
ATXN3-224ENST00000554040 MCM3APO60318 1980 aa8.17□□□□□ -1.1
ATXN3-224ENST00000554040 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
ATXN3-224ENST00000554040 TMEM221A6NGB7 291 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 M0R296 226 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 NCK2O43639 380 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 KPNA6O60684 536 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 EFCAB14O75071 495 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 SASH3O75995 380 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-224ENST00000554040 EPB42P16452 691 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 RAC1P63000 192 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 SMAD2Q15796 467 aaKnown RBP8.16□□□□□ -1.1
ATXN3-224ENST00000554040 C11orf91Q3C1V1 193 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 BRDTQ58F21 947 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-224ENST00000554040 PRSS36Q5K4E3 855 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 CTR9Q6PD62 1173 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 EP400NLQ6ZTU2 488 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 RPAP2Q8IXW5 612 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-224ENST00000554040 OR6J1Q8NGC5 347 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 PPP1R13LQ8WUF5 828 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
ATXN3-224ENST00000554040 IRF2BPLQ9H1B7 796 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 RNF146Q9NTX7 359 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 CYP39A1Q9NYL5 469 aa8.16□□□□□ -1.1
ATXN3-224ENST00000554040 SCN5AQ14524 2016 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 PARP14Q460N5 1801 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 GOLIM4O00461 696 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 IPO8O15397 1037 aaKnown RBP8.15□□□□□ -1.1
ATXN3-224ENST00000554040 ANP32CO43423 234 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 NBNO60934 754 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 MBD4O95243 580 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 LTBRP36941 435 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 GPLD1P80108 840 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 IKBKEQ14164 716 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 PTGISQ16647 500 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 TCTN1Q2MV58 587 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 EPC2Q52LR7 807 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 FAM117BQ6P1L5 589 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 ERMP1Q7Z2K6 904 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 AACSQ86V21 672 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
ATXN3-224ENST00000554040 CTAGE1Q96RT6 745 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
ATXN3-224ENST00000554040 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 ALG13Q9NP73 1137 aaKnown RBP8.15□□□□□ -1.1
ATXN3-224ENST00000554040 FAM86C1Q9NVL1 165 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 CLDND1Q9NY35 253 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 SYNPO2Q9UMS6 1093 aa8.15□□□□□ -1.1
ATXN3-224ENST00000554040 GVINP1Q7Z2Y8 2422 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms