RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TPM2P07951 284 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 TPM1P09493 284 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 HOXA7P31268 230 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 SEPT14Q6ZU15 432 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 IRX2Q9BZI1 471 aaPredicted RBP14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 PRDM4Q9UKN5 801 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 SIK3Q9Y2K2 1263 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 ARID2Q68CP9 1835 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 TGFB1I1O43294 461 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 WDR59Q6PJI9 974 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 WDR64B1ANS9 1081 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 TISP43B9A030 160 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 ZNF862O60290 1169 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 CYP2C8P10632 490 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 FKBP15Q5T1M5 1219 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 GPRASP2Q96D09 838 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 PLCD4Q9BRC7 762 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 MMRN2Q9H8L6 949 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 OLFML3Q9NRN5 406 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 GABBR1Q9UBS5 961 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 CAPN11Q9UMQ6 739 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 TFR2Q9UP52 801 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 AGTPBP1Q9UPW5 1226 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 KCNH4Q9UQ05 1017 aa14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 LUC7L2Q9Y383 392 aaKnown RBP14.05□□□□□ -0.16
VIPAS39-206ENST00000553888 AKAP3O75969 853 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 KCNMA1Q12791 1236 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 PPIL2Q13356 520 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 NEK9Q8TD19 979 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ERGIC2Q96RQ1 377 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 LZTFL1Q9NQ48 299 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 RBPJLQ9UBG7 517 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 GAP43P17677 238 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ZNF131P52739 623 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 WDR78Q5VTH9 848 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 SWSAP1Q6NVH7 229 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 TRIM65Q6PJ69 517 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ANO5Q75V66 913 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 CYFIP1Q7L576 1253 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ZNF720Q7Z2F6 126 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 CHST13Q8NET6 341 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ADGRG1Q9Y653 693 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 CXCL11O14625 94 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 NR3C1P04150 777 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 MUTP22033 750 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 KRT76Q01546 638 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 TRIM14Q14142 442 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 XKR9Q5GH70 373 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 ARMC9Q7Z3E5 817 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 CCDC60Q8IWA6 550 aaPredicted RBP14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
VIPAS39-206ENST00000553888 GUCY2CP25092 1073 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 PSMC5P62195 406 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 BMT2Q1RMZ1 405 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 ZC3H3Q8IXZ2 948 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 OR8K1Q8NGG5 319 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 CEP63Q96MT8 703 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 DNAJC7Q99615 494 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 JPH1Q9HDC5 661 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 CETN3O15182 167 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 KIF20AO95235 890 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 PLEKP08567 350 aaPredicted RBP14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 FECHP22830 423 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 JAK3P52333 1124 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 ACTR2P61160 394 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 EDRF1Q3B7T1 1238 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 MYRIPQ8NFW9 859 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 CCDC43Q96MW1 224 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 TYW1Q9NV66 732 aaKnown RBP14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 DNAI1Q9UI46 699 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 PCDHA10Q9Y5I2 948 aa14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.03□□□□□ -0.16
VIPAS39-206ENST00000553888 SPATA31C2B4DYI2 1134 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 POTEB2H3BUK9 544 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 K7ENM7 598 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 PDXKO00764 312 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 STXBP2Q15833 593 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 DCAF17Q5H9S7 520 aaPredicted RBP14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 LDLRAD1Q5T700 205 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 C4orf19Q8IY42 314 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 CCDC51Q96ER9 411 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 SLC9A2Q9UBY0 812 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 DBR1Q9UK59 544 aaKnown RBP14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 ODF2LQ9ULJ1 636 aa14.02□□□□□ -0.16
VIPAS39-206ENST00000553888 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 CYP2J2P51589 502 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 FAM102BQ5T8I3 360 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms