RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	TCF25	Q9BQ70	676 aa		10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	APOL5	Q9BWW9	433 aa		10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	CELF4	Q9BZC1	486 aa	Known RBP	10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	SENP2	Q9HC62	589 aa		10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	RGS18	Q9NS28	235 aa		10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	TYW1	Q9NV66	732 aa	Known RBP	10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	TMEM260	Q9NX78	707 aa		10.46	□□□□□ -0.73
PRKCH-208	ENST00000553846	C2orf16	Q68DN1	1984 aa		10.46	□□□□□ -0.74
PRKCH-208	ENST00000553846	RRN3P2	A6NIE6	340 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	TBKBP1	A7MCY6	615 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	FGFR1	P11362	822 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	PDE4A	P27815	886 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	ITIH3	Q06033	890 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	DSC3	Q14574	896 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	LLGL2	Q6P1M3	1020 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	USP17L6P	Q6QN14	398 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	NECTIN4	Q96NY8	510 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	IL25	Q9H293	177 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	SMARCAD1	Q9H4L7	1026 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	CDHR5	Q9HBB8	845 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	NGRN	Q9NPE2	291 aa	Known RBP	10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	AAAS	Q9NRG9	546 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	DLL3	Q9NYJ7	618 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	UST	Q9Y2C2	406 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	NOC2L	Q9Y3T9	749 aa	Known RBP	10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	UBIAD1	Q9Y5Z9	338 aa		10.45	□□□□□ -0.74
PRKCH-208	ENST00000553846	SMIM35	A0A1B0GVV1	85 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	C2orf71	A6NGG8	1288 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	ZBTB42	B2RXF5	422 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	SRGAP2B	P0DMP2	458 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	LAG3	P18627	525 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	SDS	P20132	328 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	PBX3	P40426	434 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	TRAF1	Q13077	416 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	PLCB4	Q15147	1175 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	ANGPT1	Q15389	498 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	KIAA1841	Q6NSI8	718 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	SLC24A5	Q71RS6	500 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	ZBTB33	Q86T24	672 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	THNSL1	Q8IYQ7	743 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	MRPL43	Q8N983	215 aa	Known RBP	10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	MICAL1	Q8TDZ2	1067 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	CASP10	Q92851	521 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	CASD1	Q96PB1	797 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	ADAM2	Q99965	735 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	UBAC1	Q9BSL1	405 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	DSCC1	Q9BVC3	393 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	TSHZ2	Q9NRE2	1034 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	C1orf112	Q9NSG2	853 aa		10.44	□□□□□ -0.74
PRKCH-208	ENST00000553846	DOCK8	Q8NF50	2099 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	EVPL	Q92817	2033 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	IGKV6D-21	A0A0A0MT36	114 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	CLASP2	O75122	1294 aa	Known RBP	10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	EOMES	O95936	686 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	IGBP1	P78318	339 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	KRT76	Q01546	638 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	TPRN	Q4KMQ1	711 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	KANK3	Q6NY19	840 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	KCNT2	Q6UVM3	1135 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	FAM228A	Q86W67	206 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	KIAA0319L	Q8IZA0	1049 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	SLC39A11	Q8N1S5	342 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	NME8	Q8N427	588 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	DTWD2	Q8NBA8	298 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	CDHR1	Q96JP9	859 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	KRT23	Q9C075	422 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	ELAC1	Q9H777	363 aa	Known RBP	10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	CNNM2	Q9H8M5	875 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	TMEM161A	Q9NX61	479 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	ST3GAL5	Q9UNP4	418 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	PCDHB7	Q9Y5E2	793 aa		10.43	□□□□□ -0.74
PRKCH-208	ENST00000553846	CACNA1I	Q9P0X4	2223 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	CACNA1G	O43497	2377 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	ATG7	O95352	703 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	WEE2	P0C1S8	567 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	MTHFR	P42898	656 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	MFAP1	P55081	439 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	MTHFD1L	Q6UB35	978 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	PLPPR4	Q7Z2D5	763 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	DGLUCY	Q7Z3D6	616 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	NLRX1	Q86UT6	975 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	TDRD5	Q8NAT2	981 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	SLC22A17	Q8WUG5	538 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	GLG1	Q92896	1179 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	TMEM117	Q9H0C3	514 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	JPH1	Q9HDC5	661 aa	Predicted RBP	10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	ENTPD7	Q9NQZ7	604 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	LIMD1	Q9UGP4	676 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	LRFN2	Q9ULH4	789 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	DUSP12	Q9UNI6	340 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	TAF6L	Q9Y6J9	622 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	BAHCC1	Q9P281	2608 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	ASPM	Q8IZT6	3477 aa		10.42	□□□□□ -0.74
PRKCH-208	ENST00000553846	ZZEF1	O43149	2961 aa		10.41	□□□□□ -0.74
PRKCH-208	ENST00000553846	FRY	Q5TBA9	3013 aa		10.41	□□□□□ -0.74
PRKCH-208	ENST00000553846		M0QZ92	97 aa		10.41	□□□□□ -0.74
PRKCH-208	ENST00000553846	GPR32	O75388	356 aa		10.41	□□□□□ -0.74
PRKCH-208	ENST00000553846	RPS6KA5	O75582	802 aa		10.41	□□□□□ -0.74
PRKCH-208	ENST00000553846	LMNA	P02545	664 aa	Known RBP	10.41	□□□□□ -0.74
PRKCH-208	ENST00000553846	PPM1A	P35813	382 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms