RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 FBXO47Q5MNV8 452 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 HERC6Q8IVU3 1022 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 KIAA0319LQ8IZA0 1049 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 BANK1Q8NDB2 785 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 IFIH1Q9BYX4 1025 aaKnown RBP22.91■■□□□ 1.26
FOXA1-203ENST00000553751 NRBP2Q9NSY0 501 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 MSRAQ9UJ68 235 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 PCDHA11Q9Y5I1 949 aa22.91■■□□□ 1.26
FOXA1-203ENST00000553751 BAG4O95429 457 aaKnown RBP22.9■■□□□ 1.26
FOXA1-203ENST00000553751 U2AF2P26368 475 aaKnown RBP eCLIP22.9■■□□□ 1.26
FOXA1-203ENST00000553751 GJB2P29033 226 aa22.9■■□□□ 1.26
FOXA1-203ENST00000553751 PSMC5P62195 406 aa22.9■■□□□ 1.26
FOXA1-203ENST00000553751 GNL2Q13823 731 aaKnown RBP22.9■■□□□ 1.26
FOXA1-203ENST00000553751 IER5Q5VY09 327 aa22.9■■□□□ 1.26
FOXA1-203ENST00000553751 NME8Q8N427 588 aa22.9■■□□□ 1.26
FOXA1-203ENST00000553751 MTMR9Q96QG7 549 aa22.9■■□□□ 1.26
FOXA1-203ENST00000553751 TRPV2Q9Y5S1 764 aa22.9■■□□□ 1.26
FOXA1-203ENST00000553751 KDM3AQ9Y4C1 1321 aa22.89■■□□□ 1.26
FOXA1-203ENST00000553751 MYOGP15173 224 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 ATP2B1P20020 1258 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 TARBP2Q15633 366 aaKnown RBP22.89■■□□□ 1.25
FOXA1-203ENST00000553751 XKR3Q5GH77 459 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 NCAPH2Q6IBW4 605 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 TMCO2Q7Z6W1 182 aaPredicted RBP22.89■■□□□ 1.25
FOXA1-203ENST00000553751 LINC01465Q8N7H1 131 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 APBB2Q92870 758 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 TMEM60Q9H2L4 133 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 NKX2-4Q9H2Z4 354 aa22.89■■□□□ 1.25
FOXA1-203ENST00000553751 SEPT9Q9UHD8 586 aaPredicted RBP22.89■■□□□ 1.25
FOXA1-203ENST00000553751 EVPLQ92817 2033 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 TMEM150BA6NC51 233 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 M0QZ92 97 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 MAGEB2O15479 319 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 MCM7P33993 719 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 QARSP47897 775 aaKnown RBP22.88■■□□□ 1.25
FOXA1-203ENST00000553751 EPHA7Q15375 998 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.88■■□□□ 1.25
FOXA1-203ENST00000553751 TSHZ1Q6ZSZ6 1077 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 CEP89Q96ST8 783 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 NIFKQ9BYG3 293 aaKnown RBP22.88■■□□□ 1.25
FOXA1-203ENST00000553751 CELF4Q9BZC1 486 aaKnown RBP22.88■■□□□ 1.25
FOXA1-203ENST00000553751 ZNF576Q9H609 170 aa22.88■■□□□ 1.25
FOXA1-203ENST00000553751 WRAP73Q9P2S5 460 aaPredicted RBP22.88■■□□□ 1.25
FOXA1-203ENST00000553751 P4HBP07237 508 aaKnown RBP22.87■■□□□ 1.25
FOXA1-203ENST00000553751 TRAPPC10P48553 1259 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 ORC2Q13416 577 aaPredicted RBP22.87■■□□□ 1.25
FOXA1-203ENST00000553751 CUL4AQ13619 759 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 TTC38Q5R3I4 469 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 ANO5Q75V66 913 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 METTL13Q8N6R0 699 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 LXNQ9BS40 222 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 TTC12Q9H892 705 aaPredicted RBP22.87■■□□□ 1.25
FOXA1-203ENST00000553751 AGO3Q9H9G7 860 aaKnown RBP22.87■■□□□ 1.25
FOXA1-203ENST00000553751 PCDHA12Q9UN75 941 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 SMC3Q9UQE7 1217 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.87■■□□□ 1.25
FOXA1-203ENST00000553751 SQORQ9Y6N5 450 aa22.87■■□□□ 1.25
FOXA1-203ENST00000553751 TXKP42681 527 aa22.86■■□□□ 1.25
FOXA1-203ENST00000553751 CLCN3P51790 818 aa22.86■■□□□ 1.25
FOXA1-203ENST00000553751 MTERF2Q49AM1 385 aa22.86■■□□□ 1.25
FOXA1-203ENST00000553751 LRRC71Q8N4P6 559 aa22.86■■□□□ 1.25
FOXA1-203ENST00000553751 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.85■■□□□ 1.25
FOXA1-203ENST00000553751 GJB5O95377 273 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 AMHP03971 560 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 CA3P07451 260 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 CD52P31358 61 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 TBC1D8BQ0IIM8 1120 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 GRIN2CQ14957 1233 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 ZNF174Q15697 407 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 EFCAB12Q6NXP0 572 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 USP38Q8NB14 1042 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 DYDC2Q96IM9 177 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 CDX2Q99626 313 aaPredicted RBP22.85■■□□□ 1.25
FOXA1-203ENST00000553751 SH2D3AQ9BRG2 576 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 SLC28A3Q9HAS3 691 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 CDHR5Q9HBB8 845 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 RGL1Q9NZL6 768 aa22.85■■□□□ 1.25
FOXA1-203ENST00000553751 NOL7Q9UMY1 257 aaKnown RBP22.85■■□□□ 1.25
FOXA1-203ENST00000553751 LOXHD1Q8IVV2 1947 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 DDX11L8A8MPP1 907 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 TLL1O43897 1013 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 DKC1O60832 514 aaKnown RBP eCLIP22.84■■□□□ 1.25
FOXA1-203ENST00000553751 VTNP04004 478 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 TOB1P50616 345 aaPredicted RBP22.84■■□□□ 1.25
FOXA1-203ENST00000553751 CYP4A11Q02928 519 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 NBR1Q14596 966 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 PPP2R2DQ66LE6 453 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 PLA2G4FQ68DD2 849 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 C4orf19Q8IY42 314 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 MYOCDQ8IZQ8 938 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 TMEM40Q8WWA1 233 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 PPP1R16BQ96T49 567 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 GINS2Q9Y248 185 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 CHD7Q9P2D1 2997 aa22.84■■□□□ 1.25
FOXA1-203ENST00000553751 IGKV6-21A0A0C4DH24 114 aa22.83■■□□□ 1.25
FOXA1-203ENST00000553751 POTEMA6NI47 508 aa22.83■■□□□ 1.25
FOXA1-203ENST00000553751 GPR32O75388 356 aa22.83■■□□□ 1.25
FOXA1-203ENST00000553751 OR52Z1P0C646 297 aa22.83■■□□□ 1.25
FOXA1-203ENST00000553751 TMOD1P28289 359 aa22.83■■□□□ 1.25
FOXA1-203ENST00000553751 CTTNQ14247 550 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms