RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 CDK5RAP3Q96JB5 506 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 CTAGE1Q96RT6 745 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 SEZ6LQ9BYH1 1024 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 CYP26B1Q9NR63 512 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 NRBP2Q9NSY0 501 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 HDAC6Q9UBN7 1215 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 STK17AQ9UEE5 414 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 SEPT9Q9UHD8 586 aaPredicted RBP20.14■□□□□ 0.81
PSEN1-208ENST00000553719 TRPC6Q9Y210 931 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 PPME1Q9Y570 386 aa20.14■□□□□ 0.81
PSEN1-208ENST00000553719 NRCAMQ92823 1304 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 MBLAC1A4D2B0 266 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-208ENST00000553719 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 SLC12A3P55017 1021 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 NPEPPSP55786 919 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 ZRSR1Q15695 479 aaKnown RBP20.13■□□□□ 0.81
PSEN1-208ENST00000553719 GRIK4Q16099 956 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 ZNF484Q5JVG2 852 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 TNS4Q8IZW8 715 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 FMR1NBQ8N0W7 255 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-208ENST00000553719 PDILTQ8N807 584 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 PAWRQ96IZ0 340 aaKnown RBP20.13■□□□□ 0.81
PSEN1-208ENST00000553719 DNM3Q9UQ16 869 aa20.13■□□□□ 0.81
PSEN1-208ENST00000553719 GOLGA6L4A6NEF3 574 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 ARVCFO00192 962 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 POLR2DO15514 142 aaKnown RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 ACTN4O43707 911 aaKnown RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 C22orf31O95567 290 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 LIG1P18858 919 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 MCM4P33991 863 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 RRAGBQ5VZM2 374 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 OTUD6AQ7L8S5 288 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 LINC01465Q8N7H1 131 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 SYT2Q8N9I0 419 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 TRAPPC12Q8WVT3 735 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 LARP4BQ92615 738 aaKnown RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 SH2D3AQ9BRG2 576 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 PYM1Q9BRP8 204 aaKnown RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 PANK2Q9BZ23 570 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 SENP6Q9GZR1 1112 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 BHMT2Q9H2M3 363 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 CUEDC2Q9H467 287 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 C11orf49Q9H6J7 331 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 PDLIM7Q9NR12 457 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 SETD4Q9NVD3 440 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 KAT6AQ92794 2004 aa20.12■□□□□ 0.81
PSEN1-208ENST00000553719 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
PSEN1-208ENST00000553719 IGKV6-21A0A0C4DH24 114 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 RRN3P2A6NIE6 340 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 PLA2G4BP0C869 781 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 STAT6P42226 847 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 FAM160A1Q05DH4 1040 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 MTERF2Q49AM1 385 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 XKR9Q5GH70 373 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 GDF6Q6KF10 455 aaPredicted RBP20.11■□□□□ 0.81
PSEN1-208ENST00000553719 TRMT1LQ7Z2T5 733 aaKnown RBP20.11■□□□□ 0.81
PSEN1-208ENST00000553719 C7orf31Q8N865 590 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 IQUBQ8NA54 791 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 RASSF8Q8NHQ8 419 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 CEP170P1Q96L14 293 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 MTRQ99707 1265 aa20.11■□□□□ 0.81
PSEN1-208ENST00000553719 DHX33Q9H6R0 707 aaKnown RBP20.11■□□□□ 0.81
PSEN1-208ENST00000553719 C17orf102A2RUQ5 167 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 GOLGA6L22H0YM25 854 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 MAFO75444 373 aaPredicted RBP20.1■□□□□ 0.81
PSEN1-208ENST00000553719 SYKP43405 635 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 SLC39A5Q6ZMH5 540 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 NECAB2Q7Z6G3 386 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 DHX58Q96C10 678 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 XPNPEP1Q9NQW7 623 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 KBTBD4Q9NVX7 518 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 ALPK3Q96L96 1907 aa20.1■□□□□ 0.81
PSEN1-208ENST00000553719 NR1I2O75469 434 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 SLFN14P0C7P3 912 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 RFC5P40937 340 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 ZNF200P98182 395 aaPredicted RBP20.09■□□□□ 0.81
PSEN1-208ENST00000553719 MCM6Q14566 821 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 LONRF3Q496Y0 759 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 PADI6Q6TGC4 694 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 MTHFD1LQ6UB35 978 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 C1orf186Q6ZWK4 172 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 ANKRD33Q7Z3H0 272 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 SH3RF1Q7Z6J0 888 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 FAM126BQ8IXS8 530 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 ZBTB10Q96DT7 871 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 RUSC1Q9BVN2 902 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 MAGEF1Q9HAY2 307 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 USP25Q9UHP3 1055 aa20.09■□□□□ 0.81
PSEN1-208ENST00000553719 TREHO43280 583 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 DGAT1O75907 488 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 ZNF202O95125 648 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 CD4P01730 458 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 CYP11B2P19099 503 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 SOX10P56693 466 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 CHMP4BP1P59074 171 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 IGBP1P78318 339 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 MKRN4PQ13434 485 aaPredicted RBP20.08■□□□□ 0.81
PSEN1-208ENST00000553719 TPRNQ4KMQ1 711 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 ARSHQ5FYA8 562 aa20.08■□□□□ 0.81
PSEN1-208ENST00000553719 RINT1Q6NUQ1 792 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms