RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 CNTNAP3Q9BZ76 1288 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 RGS18Q9NS28 235 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 PCDHB7Q9Y5E2 793 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 PCDHA2Q9Y5H9 948 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 USP24Q9UPU5 2620 aa11.09□□□□□ -0.63
CHD8-205ENST00000553651 PNMA6FA0A0J9YX94 578 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 MEIS2O14770 477 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 FGFR1P11362 822 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 ITGB5P18084 799 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 LAG3P18627 525 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 PDE4AP27815 886 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 GRM4Q14833 912 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 SPOUT1Q5T280 376 aaKnown RBP11.08□□□□□ -0.64
CHD8-205ENST00000553651 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 USP17L6PQ6QN14 398 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 CYB5R4Q7L1T6 521 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
CHD8-205ENST00000553651 GPRASP2Q96D09 838 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 ADAM2Q99965 735 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 SMARCAD1Q9H4L7 1026 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
CHD8-205ENST00000553651 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
CHD8-205ENST00000553651 NOC2LQ9Y3T9 749 aaKnown RBP11.08□□□□□ -0.64
CHD8-205ENST00000553651 SMIM35A0A1B0GVV1 85 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 C2orf71A6NGG8 1288 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 CLASP2O75122 1294 aaKnown RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 LMNAP02545 664 aaKnown RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 PBX3P40426 434 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 MTHFRP42898 656 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 KRT76Q01546 638 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 DSC3Q14574 896 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 PUM1Q14671 1186 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHD8-205ENST00000553651 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 IFIT1BQ5T764 474 aaKnown RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 KIAA1841Q6NSI8 718 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 KCNT2Q6UVM3 1135 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 FAM43BQ6ZT52 329 aaPredicted RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 KIAA2013Q8IYS2 634 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 C12orf76Q8N812 135 aaPredicted RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 MRPL43Q8N983 215 aaKnown RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 TDRD5Q8NAT2 981 aaKnown RBP11.07□□□□□ -0.64
CHD8-205ENST00000553651 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 GLG1Q92896 1179 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 CASD1Q96PB1 797 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 SEMA4AQ9H3S1 761 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 ENTPD7Q9NQZ7 604 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 USTQ9Y2C2 406 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 UBIAD1Q9Y5Z9 338 aa11.07□□□□□ -0.64
CHD8-205ENST00000553651 PIK3CDO00329 1044 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 EOMESO95936 686 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 IBSPP21815 317 aaPredicted RBP11.06□□□□□ -0.64
CHD8-205ENST00000553651 NFX1Q12986 1120 aaKnown RBP11.06□□□□□ -0.64
CHD8-205ENST00000553651 TRAF1Q13077 416 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 RARS2Q5T160 578 aaKnown RBP11.06□□□□□ -0.64
CHD8-205ENST00000553651 CES5AQ6NT32 575 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 NME8Q8N427 588 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 RTP3Q9BQQ7 232 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 ELAC1Q9H777 363 aaKnown RBP11.06□□□□□ -0.64
CHD8-205ENST00000553651 TMEM161AQ9NX61 479 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 R4GN57 208 aa11.06□□□□□ -0.64
CHD8-205ENST00000553651 CACNA1IQ9P0X4 2223 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 M0QZ92 97 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 SDSP20132 328 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 SLC39A11Q8N1S5 342 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 SLC22A17Q8WUG5 538 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 UBAC1Q9BSL1 405 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 KRT23Q9C075 422 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 CYP26B1Q9NR63 512 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 PUF60Q9UHX1 559 aaKnown RBP11.05□□□□□ -0.64
CHD8-205ENST00000553651 DUSP12Q9UNI6 340 aa11.05□□□□□ -0.64
CHD8-205ENST00000553651 EVPLQ92817 2033 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 BAHCC1Q9P281 2608 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 KRBA1A5PL33 1030 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 RPS6KA5O75582 802 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 EPCAMP16422 314 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 TROAPQ12815 778 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 TDGQ13569 410 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 SMC1AQ14683 1233 aaKnown RBP11.04□□□□□ -0.64
CHD8-205ENST00000553651 SIX5Q8N196 739 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 DCLK2Q8N568 766 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 CDHR1Q96JP9 859 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 ZNF558Q96NG5 402 aa11.04□□□□□ -0.64
CHD8-205ENST00000553651 DSCC1Q9BVC3 393 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms