RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ASGR1P07306 291 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 AKR1B1P15121 316 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ERVK-21P61565 698 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ATP8B2P98198 1209 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ICA1Q05084 483 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SETDB1Q15047 1291 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 HIF1AQ16665 826 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 RTN1Q16799 776 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SLC9C2Q5TAH2 1124 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MCTP2Q6DN12 878 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CERS3Q8IU89 383 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ITPRIPQ8IWB1 547 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 KIAA2013Q8IYS2 634 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MB21D1Q8N884 522 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 VTI1AQ96AJ9 217 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZNF512BQ96KM6 892 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TINF2Q9BSI4 451 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CRNKL1Q9BZJ0 848 aaKnown RBP6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 UPF3AQ9H1J1 476 aaKnown RBP6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZHX1Q9UKY1 873 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CNPY2Q9Y2B0 182 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FLNBO75369 2602 aaKnown RBP6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CDK5RAP2Q96SN8 1893 aa6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MYO5AQ9Y4I1 1855 aaKnown RBP6.68□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CYP2D7A0A087X1C5 515 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 KIF28PB7ZC32 967 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GOLIM4O00461 696 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CTAGE5O15320 804 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MBTPS2O43462 519 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DUSP11O75319 330 aaKnown RBP6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PDE6AP16499 860 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 IDH3AP50213 366 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZNF792Q3KQV3 632 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZKSCAN2Q63HK3 967 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TMEM179Q6ZVK1 233 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ARMC10Q8N2F6 343 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 LCORLQ8N3X6 602 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SSH3Q8TE77 659 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DNAJC2Q99543 621 aaKnown RBP6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 RIOK1Q9BRS2 568 aaKnown RBP6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SEZ6LQ9BYH1 1024 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ARMT1Q9H993 441 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 IL1RAPL2Q9NP60 686 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FBXO28Q9NVF7 368 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EXOC6BQ9Y2D4 811 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZNF532Q9HCE3 1301 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 WDR87Q6ZQQ6 2873 aa6.67□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FOCADQ5VW36 1801 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 LINC01553A4QN01 128 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 J3QW42 95 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 STXBP3O00186 592 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ADCY6O43306 1168 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PRKAB2O43741 272 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 LGR5O75473 907 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SLC25A27O95847 323 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 RARAP10276 462 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 STAT3P40763 770 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GJA9P57773 515 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GABPAQ06546 454 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DLX2Q07687 328 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PDE4CQ08493 712 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TCEAL5Q5H9L2 206 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 FAM83BQ5T0W9 1011 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MAMDC4Q6UXC1 1216 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TMCO2Q7Z6W1 182 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DEFB128Q7Z7B8 93 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 STK11IPQ8N1F8 1099 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TMEM105Q8N8V8 129 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PCSK9Q8NBP7 692 aaKnown RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MRPL38Q96DV4 380 aaKnown RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TGS1Q96RS0 853 aaKnown RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TRPV6Q9H1D0 765 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 SH2D4AQ9H788 454 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 VCPKMTQ9H867 229 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 DCP1AQ9NPI6 582 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 ASH1LQ9NR48 2969 aaKnown RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GRIN2DO15399 1336 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TNKSO95271 1327 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EP300Q09472 2414 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CEP250Q9BV73 2442 aa6.66□□□□□ -1.34
SMARCE1P3-201ENST00000553649 PRR19A6NJB7 356 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 LOC730098B7Z3J9 87 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 VWA5AO00534 786 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 WDR46O15213 610 aaKnown RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 IGSF3O75054 1194 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 MBD4O95243 580 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EEF2P13639 858 aaKnown RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 GLB1P16278 677 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EIF2AK2P19525 551 aaKnown RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 NRLP54845 237 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CBX2Q14781 532 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 TTF1Q15361 905 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 CLUL1Q15846 466 aa6.65□□□□□ -1.34
SMARCE1P3-201ENST00000553649 EP400NLQ6ZTU2 488 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms