RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 NPAS4Q8IUM7 802 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 METTL13Q8N6R0 699 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 FAM167AQ96KS9 214 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 UIMC1Q96RL1 719 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 PLVAPQ9BX97 442 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 NSUN3Q9H649 340 aaKnown RBP14.44□□□□□ -0.1
LINC00643-202ENST00000553426 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 VPS54Q9P1Q0 977 aa14.44□□□□□ -0.1
LINC00643-202ENST00000553426 MAFBQ9Y5Q3 323 aaPredicted RBP14.44□□□□□ -0.1
LINC00643-202ENST00000553426 DENND3A2RUS2 1198 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 WDR64B1ANS9 1081 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 GPR182O15218 404 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 DGKIO75912 1065 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 LEXMQ3ZCV2 418 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 EP400NLQ6ZTU2 488 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 TRMT1LQ7Z2T5 733 aaKnown RBP14.43□□□□□ -0.1
LINC00643-202ENST00000553426 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
LINC00643-202ENST00000553426 KIAA0319LQ8IZA0 1049 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 RASGRP4Q8TDF6 673 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 CLP1Q92989 425 aaKnown RBP14.43□□□□□ -0.1
LINC00643-202ENST00000553426 NCOA5Q9HCD5 579 aaKnown RBP14.43□□□□□ -0.1
LINC00643-202ENST00000553426 FAM50BQ9Y247 325 aa14.43□□□□□ -0.1
LINC00643-202ENST00000553426 MAGEB2O15479 319 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 GAS7O60861 476 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 DEXIO95424 95 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 TMOD1P28289 359 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 TMEM266Q2M3C6 531 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 PPP2R3CQ969Q6 453 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 ZNF689Q96CS4 500 aaPredicted RBP14.42□□□□□ -0.1
LINC00643-202ENST00000553426 PABPC5Q96DU9 382 aaKnown RBP14.42□□□□□ -0.1
LINC00643-202ENST00000553426 ZNF274Q96GC6 653 aaPredicted RBP14.42□□□□□ -0.1
LINC00643-202ENST00000553426 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 TM6SF1Q9BZW5 370 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 EPHX3Q9H6B9 360 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 RC3H2Q9HBD1 1191 aaKnown RBP14.42□□□□□ -0.1
LINC00643-202ENST00000553426 DISC1Q9NRI5 854 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 NRBP2Q9NSY0 501 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 GABBR1Q9UBS5 961 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 PCDHB7Q9Y5E2 793 aa14.42□□□□□ -0.1
LINC00643-202ENST00000553426 TTC3P53804 2025 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 IBSPP21815 317 aaPredicted RBP14.41□□□□□ -0.1
LINC00643-202ENST00000553426 SFNP31947 248 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 NAALADL2Q58DX5 795 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 TCEAL5Q5H9L2 206 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 GALNT17Q6IS24 598 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 RTN4RL1Q86UN2 441 aaPredicted RBP14.41□□□□□ -0.1
LINC00643-202ENST00000553426 FAM177A1Q8N128 213 aaPredicted RBP14.41□□□□□ -0.1
LINC00643-202ENST00000553426 LINC01599Q8WXQ3 324 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 RIT2Q99578 217 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 TEKT3Q9BXF9 490 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 C1orf112Q9NSG2 853 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 PCDHA4Q9UN74 947 aa14.41□□□□□ -0.1
LINC00643-202ENST00000553426 NOC2LQ9Y3T9 749 aaKnown RBP14.41□□□□□ -0.1
LINC00643-202ENST00000553426 RALGAPA2Q2PPJ7 1873 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 ADAMTS3O15072 1205 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 MSH4O15457 936 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 CHMP2AO43633 222 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 CDKL5O76039 1030 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 C22orf31O95567 290 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 ATP4AP20648 1035 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 SARSP49591 514 aaKnown RBP14.4□□□□□ -0.1
LINC00643-202ENST00000553426 JAK3P52333 1124 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 CRYBB1P53674 252 aaPredicted RBP14.4□□□□□ -0.1
LINC00643-202ENST00000553426 TOB2Q14106 344 aaPredicted RBP14.4□□□□□ -0.1
LINC00643-202ENST00000553426 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
LINC00643-202ENST00000553426 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 PTCRAQ6ISU1 281 aaPredicted RBP14.4□□□□□ -0.1
LINC00643-202ENST00000553426 TBCKQ8TEA7 893 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 P2RX5Q93086 422 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 LENG9Q96B70 501 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 ADAM2Q99965 735 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 LRFN3Q9BTN0 628 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 AAASQ9NRG9 546 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 PDRG1Q9NUG6 133 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 CLDND1Q9NY35 253 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 ST3GAL5Q9UNP4 418 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 AKT3Q9Y243 479 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 NLRC5Q86WI3 1866 aa14.4□□□□□ -0.1
LINC00643-202ENST00000553426 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 H3BQ06 376 aaPredicted RBP14.39□□□□□ -0.11
LINC00643-202ENST00000553426 GRM6O15303 877 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 MMP1P03956 469 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 VTNP04004 478 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 OATP04181 439 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 XBP1P17861 261 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 SSTR3P32745 418 aaPredicted RBP14.39□□□□□ -0.11
LINC00643-202ENST00000553426 STK3Q13188 491 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 KIZQ2M2Z5 673 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 SPOUT1Q5T280 376 aaKnown RBP14.39□□□□□ -0.11
LINC00643-202ENST00000553426 SLC24A5Q71RS6 500 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 BLIDQ8IZY5 108 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 CRIPAKQ8N1N5 446 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.39□□□□□ -0.11
LINC00643-202ENST00000553426 NEK9Q8TD19 979 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 SLC5A5Q92911 643 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC00643-202ENST00000553426 SCLT1Q96NL6 688 aa14.39□□□□□ -0.11
LINC00643-202ENST00000553426 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms