RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TELO2Q9Y4R8 837 aa6.55□□□□□ -1.36
SCFD1-209ENST00000553280 LCHNA4D1U4 455 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 SLC27A2O14975 620 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 XPOTO43592 962 aaKnown RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 C4BPAP04003 597 aaKnown RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 TMEM253P0C7T8 217 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 TACR1P25103 407 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 CFPP27918 469 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 HTRA3P83110 453 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 TUSC3Q13454 348 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 MOGSQ13724 837 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 NR0B2Q15466 257 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 CATSPEREQ5SY80 951 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 BTBD8Q5XKL5 378 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 PPP4R4Q6NUP7 873 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 KSR2Q6VAB6 950 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 ZNF605Q86T29 641 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 CILP2Q8IUL8 1156 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 TRIM48Q8IWZ4 208 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 RBM12BQ8IXT5 1001 aaKnown RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 EXOC8Q8IYI6 725 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 FBXO41Q8TF61 875 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 SSH1Q8WYL5 1049 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 RTF1Q92541 710 aaKnown RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 INTS4Q96HW7 963 aaKnown RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 SLC6A17Q9H1V8 727 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 CCM2LQ9NUG4 571 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-209ENST00000553280 INVSQ9Y283 1065 aa6.54□□□□□ -1.36
SCFD1-209ENST00000553280 ETV2O00321 342 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ERC2O15083 957 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 EIF3JO75822 258 aaKnown RBP6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ZRANB2O95218 330 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCFD1-209ENST00000553280 IL33O95760 270 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 GLI4P10075 376 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 PRKCAP17252 672 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ENPP1P22413 925 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 AKAP5P24588 427 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 PDE6BP35913 854 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 PURAQ00577 322 aaKnown RBP6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ACAP2Q15057 778 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 CLUL1Q15846 466 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 FSCN1Q16658 493 aaKnown RBP6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ATG14Q6ZNE5 492 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 SAMD3Q8N6K7 520 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 NUP43Q8NFH3 380 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 CLEC4DQ8WXI8 215 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 SEC14L1Q92503 715 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 JADE3Q92613 823 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 KCNN1Q92952 543 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 TEKT5Q96M29 485 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 TOX2Q96NM4 488 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 PLCD4Q9BRC7 762 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ANLNQ9NQW6 1124 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 CHST12Q9NRB3 414 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 RIC8BQ9NVN3 520 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 MYOTQ9UBF9 498 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 ASH2LQ9UBL3 628 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 MSRAQ9UJ68 235 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 RCAN3Q9UKA8 241 aa6.53□□□□□ -1.36
SCFD1-209ENST00000553280 YBX2Q9Y2T7 364 aaKnown RBP6.53□□□□□ -1.36
SCFD1-209ENST00000553280 A0A1W2PQJ5 194 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 NPIPB6E9PJ23 425 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 FOXP2O15409 715 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 TRIM27P14373 513 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 HERVK_113P62684 666 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 GBX1Q14549 363 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 RRP12Q5JTH9 1297 aaKnown RBP6.52□□□□□ -1.37
SCFD1-209ENST00000553280 SYCP2LQ5T4T6 812 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 CABP7Q86V35 215 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 DCP2Q8IU60 420 aaKnown RBP6.52□□□□□ -1.37
SCFD1-209ENST00000553280 LRRC56Q8IYG6 542 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-209ENST00000553280 NETO2Q8NC67 525 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 TGFBRAP1Q8WUH2 860 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 SHISA4Q96DD7 197 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 ZNF277Q9NRM2 450 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-209ENST00000553280 DNAJC28Q9NX36 388 aa6.52□□□□□ -1.37
SCFD1-209ENST00000553280 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 RASSF10A6NK89 507 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 SGSM2O43147 1006 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 EFEMP2O95967 443 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 HSPA6P17066 643 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 AGXTP21549 392 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 MTNR1BP49286 362 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 CYP4F8P98187 520 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 OS9Q13438 667 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-209ENST00000553280 KIR3DS1Q14943 382 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 ESPNLQ6ZVH7 1005 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 CXorf67Q86X51 503 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-209ENST00000553280 IRF2BP1Q8IU81 584 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 SARGQ9BW04 601 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 MCOLN1Q9GZU1 580 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 AP5M1Q9H0R1 490 aa6.51□□□□□ -1.37
SCFD1-209ENST00000553280 PCDHB4Q9Y5E5 795 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms