RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 FAM184AQ8NB25 1140 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 FBXO18Q8NFZ0 1043 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 SLC28A3Q9HAS3 691 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.14■□□□□ 0.97
HDAC4-217ENST00000553145 TMEM150BA6NC51 233 aa21.14■□□□□ 0.97
HDAC4-217ENST00000553145 RPLP2P05387 115 aaKnown RBP21.14■□□□□ 0.97
HDAC4-217ENST00000553145 SPIRE1Q08AE8 756 aa21.14■□□□□ 0.97
HDAC4-217ENST00000553145 SAFBQ15424 915 aaKnown RBP eCLIP21.14■□□□□ 0.97
HDAC4-217ENST00000553145 IER5Q5VY09 327 aa21.14■□□□□ 0.97
HDAC4-217ENST00000553145 PPP2R2DQ66LE6 453 aa21.14■□□□□ 0.97
HDAC4-217ENST00000553145 BANK1Q8NDB2 785 aa21.14■□□□□ 0.97
HDAC4-217ENST00000553145 CELF4Q9BZC1 486 aaKnown RBP21.14■□□□□ 0.97
HDAC4-217ENST00000553145 AGO3Q9H9G7 860 aaKnown RBP21.14■□□□□ 0.97
HDAC4-217ENST00000553145 KIF28PB7ZC32 967 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 FAM117BQ6P1L5 589 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 TSHZ1Q6ZSZ6 1077 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 NME8Q8N427 588 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 LINC01465Q8N7H1 131 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 APBB2Q92870 758 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 CDHR5Q9HBB8 845 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 NRBP2Q9NSY0 501 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 CEP131Q9UPN4 1083 aa21.13■□□□□ 0.97
HDAC4-217ENST00000553145 KDM3AQ9Y4C1 1321 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 LCHNA4D1U4 455 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 M0QZ92 97 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 TLL1O43897 1013 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 MARCH6O60337 910 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 GJB5O95377 273 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 CD52P31358 61 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 CLCN3P51790 818 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 TARBP2Q15633 366 aaKnown RBP21.12■□□□□ 0.97
HDAC4-217ENST00000553145 SLFN12Q8IYM2 578 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 MYOCDQ8IZQ8 938 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 CEP89Q96ST8 783 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 PPP1R16BQ96T49 567 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 SH2D3AQ9BRG2 576 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 FOXP1Q9H334 677 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-217ENST00000553145 PRDM12Q9H4Q4 367 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 WRAP73Q9P2S5 460 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-217ENST00000553145 SEPT9Q9UHD8 586 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-217ENST00000553145 EVPLQ92817 2033 aa21.12■□□□□ 0.97
HDAC4-217ENST00000553145 NEMFO60524 1076 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 AMHP03971 560 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 VTNP04004 478 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 ATP2B1P20020 1258 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 PSMC5P62195 406 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 CALCRLQ16602 461 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 XKR3Q5GH77 459 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 NCAPH2Q6IBW4 605 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 SPRED2Q7Z698 418 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 LRRC71Q8N4P6 559 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 METTL13Q8N6R0 699 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 TMEM40Q8WWA1 233 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 ZBED2Q9BTP6 218 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 NIFKQ9BYG3 293 aaKnown RBP21.11■□□□□ 0.97
HDAC4-217ENST00000553145 TMEM60Q9H2L4 133 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 CHD9Q3L8U1 2897 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 LOXHD1Q8IVV2 1947 aa21.11■□□□□ 0.97
HDAC4-217ENST00000553145 MAGEB2O15479 319 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
HDAC4-217ENST00000553145 MCM2P49736 904 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 TAP1Q03518 808 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 EPHA7Q15375 998 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 MTERF2Q49AM1 385 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 EFCAB12Q6NXP0 572 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 LINC01599Q8WXQ3 324 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 MTMR9Q96QG7 549 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 GINS2Q9Y248 185 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 SQORQ9Y6N5 450 aa21.1■□□□□ 0.97
HDAC4-217ENST00000553145 FOSL2P15408 326 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 MCM7P33993 719 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 QARSP47897 775 aaKnown RBP21.09■□□□□ 0.97
HDAC4-217ENST00000553145 KIZQ2M2Z5 673 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 PLA2G4FQ68DD2 849 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 ANO5Q75V66 913 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 RAD9AQ99638 391 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 CERS4Q9HA82 394 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 RGL1Q9NZL6 768 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 PADI3Q9ULW8 664 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 CDH23Q9H251 3354 aa21.09■□□□□ 0.97
HDAC4-217ENST00000553145 DDX11L8A8MPP1 907 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 GPR32O75388 356 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 P4HBP07237 508 aaKnown RBP21.08■□□□□ 0.97
HDAC4-217ENST00000553145 GJB2P29033 226 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 TXKP42681 527 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 TBC1D8BQ0IIM8 1120 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 DRP2Q13474 957 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 TMEM266Q2M3C6 531 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 USP38Q8NB14 1042 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 TOP1MTQ969P6 601 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 DYDC2Q96IM9 177 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 OSMRQ99650 979 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 LXNQ9BS40 222 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 TTC12Q9H892 705 aaPredicted RBP21.08■□□□□ 0.97
HDAC4-217ENST00000553145 PCDHA12Q9UN75 941 aa21.08■□□□□ 0.97
HDAC4-217ENST00000553145 NOC2LQ9Y3T9 749 aaKnown RBP21.08■□□□□ 0.97
HDAC4-217ENST00000553145 EPOPA6NHQ4 379 aa21.07■□□□□ 0.96
HDAC4-217ENST00000553145 ENPP3O14638 875 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms