RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 HBP1O60381 514 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 KLRC1P26715 233 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 ADCY7P51828 1080 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 UBE3AQ05086 875 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 HFE2Q6ZVN8 426 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 ADGRD2Q7Z7M1 963 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 SMRP1Q8NCR6 262 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 POF1BQ8WVV4 589 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 KCNB2Q92953 911 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 PGBD1Q96JS3 809 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 RGS18Q9NS28 235 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
CKAP4-202ENST00000552828 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
CKAP4-202ENST00000552828 BRPF3Q9ULD4 1205 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
CKAP4-202ENST00000552828 ATG2AQ2TAZ0 1938 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 LOC730098B7Z3J9 87 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 MGEA5O60502 916 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 CYP3A4P08684 503 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 HMGB1P09429 215 aaKnown RBP13.47□□□□□ -0.25
CKAP4-202ENST00000552828 NDUFV1P49821 464 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 GATMP50440 423 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 RCAN1P53805 252 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 FAM189BP81408 668 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
CKAP4-202ENST00000552828 RTN1Q16799 776 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 TMEM266Q2M3C6 531 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
CKAP4-202ENST00000552828 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 FAM160B1Q5W0V3 765 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 SLC24A5Q71RS6 500 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 DHX32Q7L7V1 743 aaKnown RBP13.47□□□□□ -0.25
CKAP4-202ENST00000552828 ALYREFQ86V81 257 aaKnown RBP13.47□□□□□ -0.25
CKAP4-202ENST00000552828 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 EDAQ92838 391 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 FBXL18Q96ME1 805 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 CDHR5Q9HBB8 845 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 C1orf112Q9NSG2 853 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 LRFN2Q9ULH4 789 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 NOC2LQ9Y3T9 749 aaKnown RBP13.47□□□□□ -0.25
CKAP4-202ENST00000552828 PCDHB7Q9Y5E2 793 aa13.47□□□□□ -0.25
CKAP4-202ENST00000552828 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 C9IYK1 514 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 FAM86B1E9PN63 330 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 ZBTB43O43298 467 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 RPS6KA5O75582 802 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 GLP2RO95838 553 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 FAM86B2P0C5J1 330 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 ATP4AP20648 1035 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 NRIP1P48552 1158 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 NHLH1Q02575 133 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 NFX1Q12986 1120 aaKnown RBP13.46□□□□□ -0.25
CKAP4-202ENST00000552828 ODR4Q5SWX8 454 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 BMP8AQ7Z5Y6 402 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
CKAP4-202ENST00000552828 ADAM2Q99965 735 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 TMEM260Q9NX78 707 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 ST3GAL5Q9UNP4 418 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 SNX14Q9Y5W7 946 aa13.46□□□□□ -0.25
CKAP4-202ENST00000552828 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
CKAP4-202ENST00000552828 BACH1O14867 736 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 GPR182O15218 404 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 CSPG5O95196 566 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 C22orf31O95567 290 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 KCNA4P22459 653 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 PSMA5P28066 241 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 ZNF76P36508 570 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
CKAP4-202ENST00000552828 ADCK5Q3MIX3 580 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 PDE12Q6L8Q7 609 aaKnown RBP13.45□□□□□ -0.26
CKAP4-202ENST00000552828 SWSAP1Q6NVH7 229 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 PLA2G4DQ86XP0 818 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
CKAP4-202ENST00000552828 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
CKAP4-202ENST00000552828 TLE6Q9H808 572 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 AAASQ9NRG9 546 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 TBC1D22BQ9NU19 505 aa13.45□□□□□ -0.26
CKAP4-202ENST00000552828 MAFBQ9Y5Q3 323 aaPredicted RBP13.45□□□□□ -0.26
CKAP4-202ENST00000552828 ESYT2A0FGR8 921 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 FSCN2O14926 492 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 GPR32O75388 356 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 CDC27P30260 824 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 KCNC3Q14003 757 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 DSC3Q14574 896 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 PFKFB3Q16875 520 aaPredicted RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 ZNF746Q6NUN9 644 aaPredicted RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 TMEM184AQ6ZMB5 413 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 RBM23Q86U06 439 aaKnown RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 SMAP1Q8IYB5 467 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms