RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 RNF20Q5VTR2 975 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 SWSAP1Q6NVH7 229 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 TRMT1LQ7Z2T5 733 aaKnown RBP20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 POF1BQ8WVV4 589 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 CRYGNQ8WXF5 182 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 P2RX5Q93086 422 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 PRKAG3Q9UGI9 489 aa20.38■□□□□ 0.85
PRPF40B-215ENST00000551418 NCK2O43639 380 aa20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 HBP1O60381 514 aa20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 RBM23Q86U06 439 aaKnown RBP20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 NME8Q8N427 588 aa20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 ATP8B4Q8TF62 1192 aa20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 CLEC1BQ9P126 229 aa20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 NAP1L2Q9ULW6 460 aaPredicted RBP20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 MYH9P35579 1960 aaKnown RBP20.37■□□□□ 0.85
PRPF40B-215ENST00000551418 WDR81Q562E7 1941 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 RPLP2P05387 115 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 STAG3L1P0CL83 205 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 RBM10P98175 930 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 AP3B2Q13367 1082 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 FAM102BQ5T8I3 360 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 PDXDC2PQ6P474 469 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 NIPA1Q7RTP0 329 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 MSLNLQ96KJ4 702 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 ADAM2Q99965 735 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 ZNF302Q9NR11 478 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 CD207Q9UJ71 328 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 LRFN2Q9ULH4 789 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 FAM50BQ9Y247 325 aa20.36■□□□□ 0.85
PRPF40B-215ENST00000551418 TRIOO75962 3097 aa20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 SARSP49591 514 aaKnown RBP20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 PKN1Q16512 942 aa20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 PFKFB3Q16875 520 aaPredicted RBP20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 KIZQ2M2Z5 673 aa20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 TNPO1Q92973 898 aaKnown RBP20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 MUTYHQ9UIF7 546 aa20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 ST3GAL5Q9UNP4 418 aa20.35■□□□□ 0.85
PRPF40B-215ENST00000551418 C9IYK1 514 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 IPO5O00410 1097 aaKnown RBP20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 EDIL3O43854 480 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 RPS6KA5O75582 802 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 C22orf31O95567 290 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 GLP2RO95838 553 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 VTNP04004 478 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 CYP3A4P08684 503 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 NRIP1P48552 1158 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 SLC26A2P50443 739 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 SMAD4Q13485 552 aaKnown RBP20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 FAM160B1Q5W0V3 765 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 RASGRP4Q8TDF6 673 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 RGS18Q9NS28 235 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 PCDHB7Q9Y5E2 793 aa20.34■□□□□ 0.85
PRPF40B-215ENST00000551418 TBKBP1A7MCY6 615 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 hCG_1984214I3L0E3 225 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 PER2O15055 1255 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 NDUFV1P49821 464 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 NAALADL2Q58DX5 795 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 ZNF484Q5JVG2 852 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 MIS18BP1Q6P0N0 1132 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 FAM228AQ86W67 206 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 EFHBQ8N7U6 833 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 ZNF713Q8N859 430 aaPredicted RBP20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 OSMRQ99650 979 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 ZNF577Q9BSK1 485 aa20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.85
PRPF40B-215ENST00000551418 TECTAO75443 2155 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 GPR32O75388 356 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 FGFR1P11362 822 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 ERVFC1P60507 584 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 CSPP1Q1MSJ5 1256 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 Q6ZUG5 572 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 HFE2Q6ZVN8 426 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 RNF135Q8IUD6 432 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 TEX2Q8IWB9 1127 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 CKAP2LQ8IYA6 745 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 VN1R2Q8NFZ6 395 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 PHKBQ93100 1093 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 ZNF668Q96K58 619 aaPredicted RBP20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 ZMYND12Q9H0C1 365 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 TYW1Q9NV66 732 aaKnown RBP20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 MAFBQ9Y5Q3 323 aaPredicted RBP20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 COL1A2P08123 1366 aa20.32■□□□□ 0.84
PRPF40B-215ENST00000551418 DENND3A2RUS2 1198 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 EYA4O95677 639 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 METAP2P50579 478 aaKnown RBP eCLIP20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 CLCN3P51790 818 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 DSC3Q14574 896 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 SPOUT1Q5T280 376 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 SLC24A5Q71RS6 500 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 METTL13Q8N6R0 699 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 KCNB2Q92953 911 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 BRF1Q92994 677 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 GLT8D2Q9H1C3 349 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 GABBR1Q9UBS5 961 aa20.31■□□□□ 0.84
PRPF40B-215ENST00000551418 ESYT2A0FGR8 921 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 CRYBB1P53674 252 aaPredicted RBP20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 FAM189BP81408 668 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 PRR16Q569H4 304 aa20.3■□□□□ 0.84
PRPF40B-215ENST00000551418 ALYREFQ86V81 257 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms