RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 SLC8A1P32418 973 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 HSPA2P54652 639 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 XRCC4Q13426 336 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 EPHA7Q15375 998 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 PTPROQ16827 1216 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 DCAF17Q5H9S7 520 aaPredicted RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 ANKS4BQ8N8V4 417 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 DPH5Q9H2P9 285 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 EZRP15311 586 aaKnown RBP16.35■□□□□ 0.21
PDE1B-207ENST00000550620 DRD4P21917 467 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 JAM2P57087 298 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 BYSLQ13895 437 aaKnown RBP16.35■□□□□ 0.21
PDE1B-207ENST00000550620 NBPF9Q3BBW0 867 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 ERMARDQ5T6L9 678 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
PDE1B-207ENST00000550620 XPO6Q96QU8 1125 aaKnown RBP16.35■□□□□ 0.21
PDE1B-207ENST00000550620 HAUS2Q9NVX0 235 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
PDE1B-207ENST00000550620 KIF1CO43896 1103 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 TM4SF1P30408 202 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 STAT1P42224 750 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 PTENP60484 403 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 POU5F1Q01860 360 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 TCERG1LQ5VWI1 586 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 CROCCP2Q86T23 111 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 SLFN12Q8IYM2 578 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 ADGRF4Q8IZF3 695 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 CCDC197Q8NCU1 140 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 CCT6BQ92526 530 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 GJA10Q969M2 543 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 HVCN1Q96D96 273 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 CELF4Q9BZC1 486 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 FAM129AQ9BZQ8 928 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 PSTPIP2Q9H939 334 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 ATP8A1Q9Y2Q0 1164 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 GTPBP10A4D1E9 387 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 FAM187AA6NFU0 413 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 PHF20L1A8MW92 1017 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 FGGP02679 453 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 NUDT17P0C025 328 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 LMNB1P20700 586 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 C15orf52Q6ZUT6 534 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 FMNL3Q8IVF7 1028 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 TXLNGYQ9BZA5 131 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 KCNMB3Q9NPA1 279 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 STK24Q9Y6E0 443 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
PDE1B-207ENST00000550620 SPATA31A1Q5TZJ5 1347 aa16.34■□□□□ 0.21
PDE1B-207ENST00000550620 CCDC169A6NNP5 214 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 ELF1P32519 619 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 DR1Q01658 176 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 DHX34Q14147 1143 aaKnown RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 RFFLQ8WZ73 363 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 CARD9Q9H257 536 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 RASAL2Q9UJF2 1139 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 ODF2LQ9ULJ1 636 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 NCANO14594 1321 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 ZBTB5O15062 677 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 TRIM37O94972 964 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 TTLL1O95922 423 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 TMEM253P0C7T8 217 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 CASP5P51878 434 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 GALCP54803 685 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 GRAPQ13588 217 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 GIT2Q14161 759 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 GPATCH4Q5T3I0 446 aaKnown RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 EPM2AIP1Q7L775 607 aaPredicted RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 PGM2Q96G03 612 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 ERP44Q9BS26 406 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 SIX2Q9NPC8 291 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
PDE1B-207ENST00000550620 DAAM1Q9Y4D1 1078 aa16.33■□□□□ 0.2
PDE1B-207ENST00000550620 KIF13BQ9NQT8 1826 aa16.32■□□□□ 0.2
PDE1B-207ENST00000550620 ASAP2O43150 1006 aa16.32■□□□□ 0.2
PDE1B-207ENST00000550620 PPP1R11O60927 126 aaPredicted RBP16.32■□□□□ 0.2
PDE1B-207ENST00000550620 MED24O75448 989 aa16.32■□□□□ 0.2
PDE1B-207ENST00000550620 AKAP3O75969 853 aa16.32■□□□□ 0.2
PDE1B-207ENST00000550620 GSTA1P08263 222 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms