RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 ERVK-5Q9HDB9 667 aa14.35□□□□□ -0.11
LETMD1-222ENST00000550274 ANO2Q9NQ90 1003 aa14.35□□□□□ -0.11
LETMD1-222ENST00000550274 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
LETMD1-222ENST00000550274 GINS2Q9Y248 185 aa14.35□□□□□ -0.11
LETMD1-222ENST00000550274 MYO10Q9HD67 2058 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 EYA4O95677 639 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 KLRC1P26715 233 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 SREBF1P36956 1147 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 NRIP1P48552 1158 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 SARSP49591 514 aaKnown RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 CLK2P49760 499 aaKnown RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 NHLH1Q02575 133 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 NFX1Q12986 1120 aaKnown RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 ABHD15Q6UXT9 468 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 RBM23Q86U06 439 aaKnown RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 CCDC60Q8IWA6 550 aaPredicted RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 NME8Q8N427 588 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 EFHBQ8N7U6 833 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 SMRP1Q8NCR6 262 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 HCSTQ9UBK5 93 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 LRFN2Q9ULH4 789 aa14.34□□□□□ -0.11
LETMD1-222ENST00000550274 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 NOC2LQ9Y3T9 749 aaKnown RBP14.34□□□□□ -0.11
LETMD1-222ENST00000550274 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 ZBTB42B2RXF5 422 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 FAM86B1E9PN63 330 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 PPFIA3O75145 1194 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
LETMD1-222ENST00000550274 FAM86B2P0C5J1 330 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 SLC26A2P50443 739 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 RBM10P98175 930 aaKnown RBP14.33□□□□□ -0.12
LETMD1-222ENST00000550274 EXOSC10Q01780 885 aaKnown RBP14.33□□□□□ -0.12
LETMD1-222ENST00000550274 RTN1Q16799 776 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 SYNE3Q6ZMZ3 975 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 KIAA0319LQ8IZA0 1049 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 ATP8B4Q8TF62 1192 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 PPP2R3CQ969Q6 453 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 PPP1R16BQ96T49 567 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
LETMD1-222ENST00000550274 COL1A2P08123 1366 aa14.33□□□□□ -0.12
LETMD1-222ENST00000550274 IGLV3-22A0A075B6J6 115 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 BACH1O14867 736 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 ADAMTS3O15072 1205 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
LETMD1-222ENST00000550274 ZBTB43O43298 467 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 HBP1O60381 514 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 RPS6KA5O75582 802 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 ATP4AP20648 1035 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 COASYQ13057 564 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 ADCK5Q3MIX3 580 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 FAM102BQ5T8I3 360 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 CRYGNQ8WXF5 182 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 ADAM2Q99965 735 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
LETMD1-222ENST00000550274 PCDHB7Q9Y5E2 793 aa14.32□□□□□ -0.12
LETMD1-222ENST00000550274 TBKBP1A7MCY6 615 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 C9IYK1 514 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 PER2O15055 1255 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 CDC27P30260 824 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 ZNF76P36508 570 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 MRE11P49959 708 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 KIZQ2M2Z5 673 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 JAKMIP3Q5VZ66 844 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 SKAP1Q86WV1 359 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 PLA2G4DQ86XP0 818 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-222ENST00000550274 VN1R2Q8NFZ6 395 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 EDAQ92838 391 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 OSMRQ99650 979 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 KCNH6Q9H252 994 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 TLE6Q9H808 572 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 ZNF302Q9NR11 478 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 RGS18Q9NS28 235 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 ST3GAL5Q9UNP4 418 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 USP15Q9Y4E8 981 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-222ENST00000550274 CACNA1HO95180 2353 aa14.31□□□□□ -0.12
LETMD1-222ENST00000550274 KLF18A0A0U1RQI7 1052 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 DENND3A2RUS2 1198 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 GOLGA8AA7E2F4 631 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 GOLGA8BA8MQT2 603 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 LOC730098B7Z3J9 87 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 IPO5O00410 1097 aaKnown RBP14.3□□□□□ -0.12
LETMD1-222ENST00000550274 FGF18O76093 207 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 C22orf31O95567 290 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 FGFR1P11362 822 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 ERVFC1P60507 584 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 ZNF484Q5JVG2 852 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 SPOUT1Q5T280 376 aaKnown RBP14.3□□□□□ -0.12
LETMD1-222ENST00000550274 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
LETMD1-222ENST00000550274 SWSAP1Q6NVH7 229 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms