RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CEP89Q96ST8 783 aa25.24■■□□□ 1.63
BRF1-216ENST00000550208 SMIM35A0A1B0GVV1 85 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 RSPH10B2B2RC85 870 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 RSPH10BP0C881 870 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 NPEPPSP55786 919 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 CEBPZQ03701 1054 aaKnown RBP25.23■■□□□ 1.63
BRF1-216ENST00000550208 DEFB128Q7Z7B8 93 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 RPAINQ86UA6 219 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 CATSPER3Q86XQ3 398 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 IGSF22Q8N9C0 903 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 POLR3CQ9BUI4 534 aaPredicted RBP25.23■■□□□ 1.63
BRF1-216ENST00000550208 IL23AQ9NPF7 189 aa25.23■■□□□ 1.63
BRF1-216ENST00000550208 PP2D1A8MPX8 630 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 MAGEB2O15479 319 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 LYPLA2O95372 231 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 BMP15O95972 392 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 F13A1P00488 732 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 CTSHP09668 335 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 YWHABP31946 246 aaKnown RBP25.22■■□□□ 1.63
BRF1-216ENST00000550208 PTPAQ15257 358 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 ARL6IP4Q66PJ3 421 aaKnown RBP25.22■■□□□ 1.63
BRF1-216ENST00000550208 KIAA0319LQ8IZA0 1049 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 ERMNQ8TAM6 284 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 USP28Q96RU2 1077 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 TUFT1Q9NNX1 390 aa25.22■■□□□ 1.63
BRF1-216ENST00000550208 SCN5AQ14524 2016 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 VWA3AA6NCI4 1184 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 NBNO60934 754 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 CAND2O75155 1236 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 CHRNA1P02708 482 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 RPA1P27694 616 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 CDC25AP30304 524 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 MBTPS1Q14703 1052 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 SHHQ15465 462 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 FAM26DQ5JW98 314 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 C9orf50Q5SZB4 431 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 EFCAB12Q6NXP0 572 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 OTUD6AQ7L8S5 288 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 RSPH3Q86UC2 560 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 RPUSD2Q8IZ73 545 aaKnown RBP25.21■■□□□ 1.63
BRF1-216ENST00000550208 METTL13Q8N6R0 699 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 CEP170P1Q96L14 293 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 OSBPL7Q9BZF2 842 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 RAB34Q9BZG1 259 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 CYP26B1Q9NR63 512 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 TFIP11Q9UBB9 837 aaKnown RBP25.21■■□□□ 1.63
BRF1-216ENST00000550208 ZDHHC9Q9Y397 364 aa25.21■■□□□ 1.63
BRF1-216ENST00000550208 EVPLQ92817 2033 aa25.2■■□□□ 1.63
BRF1-216ENST00000550208 RFC2P35250 354 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 CCT6AP40227 531 aaKnown RBP25.2■■□□□ 1.62
BRF1-216ENST00000550208 TBC1D8BQ0IIM8 1120 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 TMEM62Q0P6H9 643 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 ECM1Q16610 540 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 FOXD4L6Q3SYB3 417 aaPredicted RBP25.2■■□□□ 1.62
BRF1-216ENST00000550208 TMEM240Q5SV17 173 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 FOXD4L3Q6VB84 417 aaPredicted RBP25.2■■□□□ 1.62
BRF1-216ENST00000550208 ZNF365Q70YC5 407 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 NME8Q8N427 588 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 LRRC71Q8N4P6 559 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.2■■□□□ 1.622e-6■□□□□ 8.4
BRF1-216ENST00000550208 SUGCTQ9HAC7 445 aa25.2■■□□□ 1.62
BRF1-216ENST00000550208 BRD1O95696 1058 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 CLCN3P51790 818 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 MGAT3Q09327 533 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 XKR9Q5GH70 373 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 LINC01465Q8N7H1 131 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 PIGOQ8TEQ8 1089 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 ANKEF1Q9NU02 776 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 DAXXQ9UER7 740 aaPredicted RBP25.19■■□□□ 1.62
BRF1-216ENST00000550208 CDY2AQ9Y6F7 541 aa25.19■■□□□ 1.62
BRF1-216ENST00000550208 MAFO75444 373 aaPredicted RBP25.18■■□□□ 1.62
BRF1-216ENST00000550208 FGBP02675 491 aa25.18■■□□□ 1.62
BRF1-216ENST00000550208 XRCC6P12956 609 aaKnown RBP eCLIP25.18■■□□□ 1.622e-6■■□□□ 12.3
BRF1-216ENST00000550208 MARCKSP29966 332 aaPredicted RBP25.18■■□□□ 1.62
BRF1-216ENST00000550208 MRPS6P82932 125 aaKnown RBP25.18■■□□□ 1.62
BRF1-216ENST00000550208 GRIN1Q05586 938 aa25.18■■□□□ 1.62
BRF1-216ENST00000550208 MKRN4PQ13434 485 aaPredicted RBP25.18■■□□□ 1.62
BRF1-216ENST00000550208 SNX29Q8TEQ0 813 aa25.18■■□□□ 1.62
BRF1-216ENST00000550208 ZNF396Q96N95 335 aaPredicted RBP25.18■■□□□ 1.62
BRF1-216ENST00000550208 MMTAG2Q9BU76 263 aaKnown RBP25.18■■□□□ 1.62
BRF1-216ENST00000550208 IGKV6-21A0A0C4DH24 114 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 PARNO95453 639 aaKnown RBP25.17■■□□□ 1.62
BRF1-216ENST00000550208 CXCL10P02778 98 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 IER5Q5VY09 327 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 KRT79Q5XKE5 535 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 HAUS3Q68CZ6 603 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 POTEGQ6S5H5 508 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 TDHQ8IZJ6 230 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 NACC1Q96RE7 527 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 STK24Q9Y6E0 443 aa25.17■■□□□ 1.62
BRF1-216ENST00000550208 VTNP04004 478 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 RPLP2P05387 115 aaKnown RBP25.16■■□□□ 1.62
BRF1-216ENST00000550208 TMOD1P28289 359 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 DRP2Q13474 957 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 SLC39A14Q15043 492 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 CELF4Q9BZC1 486 aaKnown RBP25.16■■□□□ 1.62
BRF1-216ENST00000550208 CDHR5Q9HBB8 845 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 KIAA1024Q9UPX6 916 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 TRPV2Q9Y5S1 764 aa25.16■■□□□ 1.62
BRF1-216ENST00000550208 TET1Q8NFU7 2136 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms