RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 A6NNZ2 444 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 DNM1LO00429 736 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 CLIC2O15247 247 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 NOL4O94818 638 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 HNRNPH3P31942 346 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 STAT3P40763 770 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 PRPHP41219 470 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 PPP1R2P41236 205 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 ITIH3Q06033 890 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 TUBB8Q3ZCM7 444 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 GKAP1Q5VSY0 366 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 TRMT1LQ7Z2T5 733 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 SEC16BQ96JE7 1060 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 TMBIM4Q9HC24 238 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 CHORDC1Q9UHD1 332 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 MYH1P12882 1939 aa11.72□□□□□ -0.53
SMARCC2-208ENST00000550150 SSU72P8A0A1W2PR75 194 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 POTECB2RU33 542 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 M0R2N6 131 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 FSBPO95073 299 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 KIF4AO95239 1232 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 ADCY1Q08828 1119 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 RAPGEF5Q92565 580 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 OSBPL7Q9BZF2 842 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 MAGEF1Q9HAY2 307 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 MLXIPLQ9NP71 852 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 ZNF277Q9NRM2 450 aaPredicted RBP11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PPP1R1BQ9UD71 204 aaPredicted RBP11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PCDHA12Q9UN75 941 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 SIPA1L1O43166 1804 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PSME4Q14997 1843 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PGRMC1O00264 195 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 FGGP02679 453 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PLTPP55058 493 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PPP2R2AP63151 447 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 CCDC38Q502W7 563 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 CYB5D1Q6P9G0 228 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.53
SMARCC2-208ENST00000550150 PJA2O43164 708 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 ECE2O60344 883 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 SKAP2O75563 359 aaPredicted RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 GFPT2O94808 682 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 BTDP43251 543 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 ADCY7P51828 1080 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 CLNS1AP54105 237 aaKnown RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 NEDD9Q14511 834 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 ASTE1Q2TB18 679 aaPredicted RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 DDX25Q9UHL0 483 aaKnown RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 UTP11Q9Y3A2 253 aaKnown RBP11.71□□□□□ -0.54
SMARCC2-208ENST00000550150 CENPFP49454 3210 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 SFI1A8K8P3 1242 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 BAG3O95817 575 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 EZRP15311 586 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 CDC25CP30307 473 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 CYP4A11Q02928 519 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 TBC1D1Q86TI0 1168 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 SPATS2Q86XZ4 545 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 DYDC1Q8WWB3 177 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 GLG1Q92896 1179 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 SLC24A3Q9HC58 644 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 CETN3O15182 167 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 RASA1P20936 1047 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 CACNB3P54284 484 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 TACO1Q9BSH4 297 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 ISCUQ9H1K1 167 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 OSGEPQ9NPF4 335 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 RNF14Q9UBS8 474 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 HDAC9Q9UKV0 1011 aa11.7□□□□□ -0.54
SMARCC2-208ENST00000550150 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 CDK8P49336 464 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 GALNT17Q6IS24 598 aa11.69□□□□□ -0.54
SMARCC2-208ENST00000550150 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms