RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 SGSM2O43147 1006 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 TGM5O43548 720 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 BUB1BO60566 1050 aaPredicted RBP5.52□□□□□ -1.53
CPNE8-206ENST00000549842 EIF5BO60841 1220 aaKnown RBP5.52□□□□□ -1.53
CPNE8-206ENST00000549842 TADA3O75528 432 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 ASGR2P07307 311 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
CPNE8-206ENST00000549842 PF4V1P10720 104 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 PDE6AP16499 860 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 PHC1P78364 1004 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 PURAQ00577 322 aaKnown RBP5.52□□□□□ -1.53
CPNE8-206ENST00000549842 SPIRE1Q08AE8 756 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 SSPNQ14714 243 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 TERF2Q15554 542 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 VPS72Q15906 364 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 SYCP2LQ5T4T6 812 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 GPR158Q5T848 1215 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 B3GNT8Q7Z7M8 397 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 OSTM1Q86WC4 334 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 FAM129CQ86XR2 697 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 MIB1Q86YT6 1006 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 ALG3Q92685 438 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 SLC39A13Q96H72 371 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 NUP88Q99567 741 aaPredicted RBP5.52□□□□□ -1.53
CPNE8-206ENST00000549842 JAM3Q9BX67 310 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 HCFC2Q9Y5Z7 792 aa5.52□□□□□ -1.53
CPNE8-206ENST00000549842 KLHL33A6NCF5 533 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 GOLGA8AA7E2F4 631 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 GOLGA8BA8MQT2 603 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 ZNF561-AS1K7EIQ3 104 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 HGSO14964 777 aaPredicted RBP5.51□□□□□ -1.53
CPNE8-206ENST00000549842 KRT37O76014 449 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 LTFP02788 710 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 GNAT1P11488 350 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 ATF2P15336 505 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 JAM2P57087 298 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 CACNB2Q08289 660 aaPredicted RBP5.51□□□□□ -1.53
CPNE8-206ENST00000549842 LRRC32Q14392 662 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 LONRF3Q496Y0 759 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 HHIPL2Q6UWX4 724 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 EP400NLQ6ZTU2 488 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 AMOTL1Q8IY63 956 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 ZNF610Q8N9Z0 462 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 CLIP3Q96DZ5 547 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 MPHOSPH6Q99547 160 aaKnown RBP5.51□□□□□ -1.53
CPNE8-206ENST00000549842 EPB41L1Q9H4G0 881 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 NGRNQ9NPE2 291 aaKnown RBP5.51□□□□□ -1.53
CPNE8-206ENST00000549842 BTG4Q9NY30 223 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 FBXL7Q9UJT9 491 aa5.51□□□□□ -1.53
CPNE8-206ENST00000549842 ERC2O15083 957 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 NUAK1O60285 661 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 DGKIO75912 1065 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 TRIM27P14373 513 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 KRT15P19012 456 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 SLC9A1P19634 815 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 PI3P19957 117 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 FPR2P25090 351 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 SCAND1P57086 179 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 SMAD3P84022 425 aaKnown RBP5.5□□□□□ -1.53
CPNE8-206ENST00000549842 FOXO4P98177 505 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 IRF9Q00978 393 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 SMAD2Q15796 467 aaKnown RBP5.5□□□□□ -1.53
CPNE8-206ENST00000549842 CNKSR3Q6P9H4 555 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 FRMD7Q6ZUT3 714 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 ZZZ3Q8IYH5 903 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 CMTR2Q8IYT2 770 aaKnown RBP5.5□□□□□ -1.53
CPNE8-206ENST00000549842 KIAA1958Q8N8K9 716 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 PHOSPHO1Q8TCT1 267 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.5□□□□□ -1.53
CPNE8-206ENST00000549842 LMBR1Q8WVP7 490 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 AIFM3Q96NN9 605 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 ELF4Q99607 663 aaPredicted RBP5.5□□□□□ -1.53
CPNE8-206ENST00000549842 SMOC1Q9H4F8 434 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 SMURF1Q9HCE7 757 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 ACSS2Q9NR19 701 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 TOMM22Q9NS69 142 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 HSPBP1Q9NZL4 362 aa5.5□□□□□ -1.53
CPNE8-206ENST00000549842 ARID1BQ8NFD5 2236 aaPredicted RBP5.5□□□□□ -1.53
CPNE8-206ENST00000549842 MAFKO60675 156 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 HIP1RO75146 1068 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 LDHAP00338 332 aaKnown RBP5.49□□□□□ -1.53
CPNE8-206ENST00000549842 AMY2AP04746 511 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 CYP17A1P05093 508 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 ZSCAN22P10073 491 aaPredicted RBP5.49□□□□□ -1.53
CPNE8-206ENST00000549842 AMY2BP19961 511 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 LPOP22079 712 aaPredicted RBP5.49□□□□□ -1.53
CPNE8-206ENST00000549842 HTRA3P83110 453 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 SAFB2Q14151 953 aaKnown RBP eCLIP5.49□□□□□ -1.53
CPNE8-206ENST00000549842 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
CPNE8-206ENST00000549842 EFCAB2Q5VUJ9 269 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 TCERG1LQ5VWI1 586 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 ZDHHC5Q9C0B5 715 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 PCIF1Q9H4Z3 704 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 RXFP1Q9HBX9 757 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 SLC6A20Q9NP91 592 aa5.49□□□□□ -1.53
CPNE8-206ENST00000549842 CHST12Q9NRB3 414 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms