RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	ATP8B4	Q8TF62	1192 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	DDX12P	Q92771	950 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	DNAJC19	Q96DA6	116 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	GSDMA	Q96QA5	445 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	C16orf70	Q9BSU1	422 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	RUSC1	Q9BVN2	902 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	NIFK	Q9BYG3	293 aa	Known RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	SPC25	Q9HBM1	224 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	HMX1	Q9NP08	348 aa	Predicted RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	NRBP2	Q9NSY0	501 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	ERAP1	Q9NZ08	941 aa		13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	DDX20	Q9UHI6	824 aa	Known RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	ZNF215	Q9UL58	517 aa	Predicted RBP	13.61	□□□□□ -0.23
ERBB3-208	ENST00000549205	KLRC4	O43908	158 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	MSC	O60682	206 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	RPN1	P04843	607 aa	Known RBP	13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	KRT18	P05783	430 aa	Known RBP	13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	MARK3	P27448	753 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	NPEPPS	P55786	919 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	ZNF445	P59923	1031 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	ASIC1	P78348	528 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	IRX5	P78411	483 aa	Predicted RBP	13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	PLCB4	Q15147	1175 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	SASS6	Q6UVJ0	657 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	C1orf186	Q6ZWK4	172 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	DYM	Q7RTS9	669 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	SH3TC2	Q8TF17	1288 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	BBX	Q8WY36	941 aa	Predicted RBP	13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	XPNPEP3	Q9NQH7	507 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	CYP26B1	Q9NR63	512 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	PPME1	Q9Y570	386 aa		13.6	□□□□□ -0.23
ERBB3-208	ENST00000549205	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	PVALEF	A0A1B0GWK0	134 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	MYADML2	A6NDP7	307 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205		H3BRB1	525 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	HBP1	O60381	514 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	KPNA6	O60684	536 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	ADAMTS4	O75173	837 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	F2	P00734	622 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	C6orf222	P0C671	652 aa	Predicted RBP	13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	GUCY2C	P25092	1073 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	BEX3	Q00994	111 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	TYRO3	Q06418	890 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	KCNB1	Q14721	858 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	TARBP2	Q15633	366 aa	Known RBP	13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	MTERF2	Q49AM1	385 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	SLC9C1	Q4G0N8	1177 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	UNC13D	Q70J99	1090 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	CEP170P1	Q96L14	293 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	REEP2	Q9BRK0	252 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	TUT1	Q9H6E5	874 aa	Known RBP	13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	RMND1	Q9NWS8	449 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	MAN1B1	Q9UKM7	699 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	TRPC6	Q9Y210	931 aa		13.59	□□□□□ -0.23
ERBB3-208	ENST00000549205	BIN1	O00499	593 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	USO1	O60763	962 aa	Known RBP	13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	PGK1	P00558	417 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	MYL3	P08590	195 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	CCDC192	P0DO97	292 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	CST5	P28325	142 aa	Predicted RBP	13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	PURA	Q00577	322 aa	Known RBP	13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	RAD51AP2	Q09MP3	1159 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	MORC3	Q14149	939 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	GIT2	Q14161	759 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	STX1A	Q16623	288 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	KMT5B	Q4FZB7	885 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	GNAS	Q5JWF2	1037 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	LRSAM1	Q6UWE0	723 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	CCDC65	Q8IXS2	484 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	TRIML1	Q8N9V2	468 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	KAT2B	Q92831	832 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	CCDC47	Q96A33	483 aa	Known RBP	13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	CEP89	Q96ST8	783 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	SH2D3A	Q9BRG2	576 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	FUCA2	Q9BTY2	467 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	TIPIN	Q9BVW5	301 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	RNPEP	Q9H4A4	650 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	EXOC1	Q9NV70	894 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	ODF2L	Q9ULJ1	636 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	COL1A2	P08123	1366 aa		13.58	□□□□□ -0.24
ERBB3-208	ENST00000549205	FRMD3	A2A2Y4	597 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	ZBTB42	B2RXF5	422 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	ZEB2	O60315	1214 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	TBCA	O75347	108 aa	Known RBP	13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	DGAT1	O75907	488 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	RHOBTB3	O94955	611 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	IDE	P14735	1019 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	RFC5	P40937	340 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	NLRP12	P59046	1061 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	CACNB1	Q02641	598 aa	Predicted RBP	13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	EHHADH	Q08426	723 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	PKN2	Q16513	984 aa	Known RBP	13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	ZNF484	Q5JVG2	852 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	LHX8	Q68G74	356 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	KLHDC9	Q8NEP7	349 aa		13.57	□□□□□ -0.24
ERBB3-208	ENST00000549205	UNC93B1	Q9H1C4	597 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms