RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 M0QZ92 97 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 TLL1O43897 1013 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 C22orf31O95567 290 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 RPAINQ86UA6 219 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 FAM167AQ96KS9 214 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 FAM20AQ96MK3 541 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 CERS4Q9HA82 394 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 PCDHA11Q9Y5I1 949 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 TRPV2Q9Y5S1 764 aa17.76■□□□□ 0.43
DDX54-205ENST00000548786 SMIM35A0A1B0GVV1 85 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 KIF28PB7ZC32 967 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 VTNP04004 478 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 IBSPP21815 317 aaPredicted RBP17.75■□□□□ 0.43
DDX54-205ENST00000548786 CD52P31358 61 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 MCM7P33993 719 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 CLCN3P51790 818 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 CALCRLQ16602 461 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 MTERF2Q49AM1 385 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 FBXO47Q5MNV8 452 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 IER5Q5VY09 327 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 B3GNT9Q6UX72 402 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 LRRC71Q8N4P6 559 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 FBXO18Q8NFZ0 1043 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 PHOSPHO2Q8TCD6 241 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 PRDM12Q9H4Q4 367 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 NRBP2Q9NSY0 501 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 MICAL3Q7RTP6 2002 aa17.75■□□□□ 0.43
DDX54-205ENST00000548786 TMEM265A0A087WTH1 108 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 LCHNA4D1U4 455 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 NEMFO60524 1076 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 ARHGEF15O94989 841 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 UPP2O95045 317 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
DDX54-205ENST00000548786 AMHP03971 560 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 PPP2R5CQ13362 524 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 TMEM266Q2M3C6 531 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 PLA2G4FQ68DD2 849 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 SPRED2Q7Z698 418 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 RDM1Q8NG50 284 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 ZNF668Q96K58 619 aaPredicted RBP17.74■□□□□ 0.43
DDX54-205ENST00000548786 CELF4Q9BZC1 486 aaKnown RBP17.74■□□□□ 0.43
DDX54-205ENST00000548786 AGO3Q9H9G7 860 aaKnown RBP17.74■□□□□ 0.43
DDX54-205ENST00000548786 SUGCTQ9HAC7 445 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 CDHR5Q9HBB8 845 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 AKT3Q9Y243 479 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 EVPLQ92817 2033 aa17.74■□□□□ 0.43
DDX54-205ENST00000548786 LOXHD1Q8IVV2 1947 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 EFCAB14O75071 495 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 FOSL2P15408 326 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 TXKP42681 527 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 CYP4A11Q02928 519 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 NBR1Q14596 966 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 ZNF174Q15697 407 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 KIZQ2M2Z5 673 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 EFCAB12Q6NXP0 572 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 TSHZ1Q6ZSZ6 1077 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 SLFN12Q8IYM2 578 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 RGL1Q9NZL6 768 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 WRAP73Q9P2S5 460 aaPredicted RBP17.73■□□□□ 0.43
DDX54-205ENST00000548786 STXBP5LQ9Y2K9 1186 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 EYSQ5T1H1 3165 aa17.73■□□□□ 0.43
DDX54-205ENST00000548786 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.72■□□□□ 0.43
DDX54-205ENST00000548786 TBX3O15119 743 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 GJB2P29033 226 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 PSMC5P62195 406 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 TBC1D8BQ0IIM8 1120 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 NOSTRINQ8IVI9 506 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 APBB2Q92870 758 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 DYDC2Q96IM9 177 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 OSMRQ99650 979 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
DDX54-205ENST00000548786 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
DDX54-205ENST00000548786 STBD1O95210 358 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 GJB5O95377 273 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 RPLP2P05387 115 aaKnown RBP17.71■□□□□ 0.43
DDX54-205ENST00000548786 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
DDX54-205ENST00000548786 MCM2P49736 904 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 SPIRE1Q08AE8 756 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 PAK2Q13177 524 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
DDX54-205ENST00000548786 CTTNQ14247 550 aaKnown RBP17.71■□□□□ 0.43
DDX54-205ENST00000548786 XKR3Q5GH77 459 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 NME8Q8N427 588 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 LXNQ9BS40 222 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 TTC12Q9H892 705 aaPredicted RBP17.71■□□□□ 0.43
DDX54-205ENST00000548786 BMP2KQ9NSY1 1161 aaPredicted RBP17.71■□□□□ 0.43
DDX54-205ENST00000548786 MTUS1Q9ULD2 1270 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 PADI3Q9ULW8 664 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 PCDHA12Q9UN75 941 aa17.71■□□□□ 0.43
DDX54-205ENST00000548786 POTEMA6NI47 508 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 RFXAPO00287 272 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 MAGEB2O15479 319 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 NPEPPSP55786 919 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 TAP1Q03518 808 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 NFX1Q12986 1120 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms