RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CFHR4Q92496 578 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 LRRC37BQ96QE4 947 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 SRPK1Q96SB4 655 aaKnown RBP6.25□□□□□ -1.41
CCDC38-206ENST00000548771 ZNF747Q9BV97 191 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 KCNH7Q9NS40 1196 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 ING1Q9UK53 422 aaPredicted RBP6.25□□□□□ -1.41
CCDC38-206ENST00000548771 TCAF1Q9Y4C2 921 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 PRAMEF25A6NGN4 478 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 GOLGA6L22H0YM25 854 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 CYR61O00622 381 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 MUSKO15146 869 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 AMHP03971 560 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 MMEP08473 750 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 MECP2P51608 486 aaKnown RBP6.24□□□□□ -1.41
CCDC38-206ENST00000548771 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
CCDC38-206ENST00000548771 WDR72Q3MJ13 1102 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 BRAPQ7Z569 592 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 PALM2Q8IXS6 379 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 FUKQ8N0W3 1084 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 BCL6BQ8N143 479 aaPredicted RBP6.24□□□□□ -1.41
CCDC38-206ENST00000548771 CISD2Q8N5K1 135 aaKnown RBP6.24□□□□□ -1.41
CCDC38-206ENST00000548771 EDAQ92838 391 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 UCKL1Q9NWZ5 548 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 ASB1Q9Y576 335 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 SLC30A1Q9Y6M5 507 aa6.24□□□□□ -1.41
CCDC38-206ENST00000548771 SCDO00767 359 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 PLSCR1O15162 318 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 CR2P20023 1033 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 RAC3P60763 192 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 CD83Q01151 205 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 KLF10Q13118 480 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 SPDYAQ5MJ70 313 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 AGBL4Q5VU57 503 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 EP400NLQ6ZTU2 488 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 PCED1AQ9H1Q7 454 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 OR10A5Q9H207 317 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
CCDC38-206ENST00000548771 SFMBT1Q9UHJ3 866 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 OAZ3Q9UMX2 235 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 PTCH2Q9Y6C5 1203 aa6.23□□□□□ -1.41
CCDC38-206ENST00000548771 RAD17O75943 681 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 CATSPEREQ5SY80 951 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 FOXRED1Q96CU9 486 aaPredicted RBP6.22□□□□□ -1.41
CCDC38-206ENST00000548771 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 GBP4Q96PP9 640 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 VPS11Q9H270 941 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 MSL2Q9HCI7 577 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 HS3ST3A1Q9Y663 406 aa6.22□□□□□ -1.41
CCDC38-206ENST00000548771 A0A0G2JNJ9 132 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 SLC12A8A0AV02 714 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 PLD2O14939 933 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 FOXP2O15409 715 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 ARHGAP6O43182 974 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 FZD7O75084 574 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 ADCY8P40145 1251 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 RRADP55042 308 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 MOGSQ13724 837 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 TMEM177Q53S58 311 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 MAMDC4Q6UXC1 1216 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 USP30Q70CQ3 517 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 RTN4RL1Q86UN2 441 aaPredicted RBP6.21□□□□□ -1.42
CCDC38-206ENST00000548771 GIMAP8Q8ND71 665 aaPredicted RBP6.21□□□□□ -1.42
CCDC38-206ENST00000548771 Q9UFV3 132 aa6.21□□□□□ -1.42
CCDC38-206ENST00000548771 PRAMEF22A3QJZ6 481 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 PMS2P1A4D2B8 440 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 HMGCRP04035 888 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 COMTP21964 271 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 TGM1P22735 817 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 KCNQ1P51787 676 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 HGFACQ04756 655 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 PCOLCEQ15113 449 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 SF3A1Q15459 793 aaKnown RBP6.2□□□□□ -1.42
CCDC38-206ENST00000548771 CC2D1AQ6P1N0 951 aaPredicted RBP6.2□□□□□ -1.42
CCDC38-206ENST00000548771 IGSF22Q8N9C0 903 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 PMFBP1Q8TBY8 1022 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 DPYSL5Q9BPU6 564 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 KIAA1683Q9H0B3 1180 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 CDC42EP3Q9UKI2 254 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 NR2E1Q9Y466 385 aa6.2□□□□□ -1.42
CCDC38-206ENST00000548771 PRKD1Q15139 912 aaPredicted RBP6.19□□□□□ -1.42
CCDC38-206ENST00000548771 ZNF568Q3ZCX4 644 aa6.19□□□□□ -1.42
CCDC38-206ENST00000548771 FNDC3BQ53EP0 1204 aaKnown RBP6.19□□□□□ -1.42
CCDC38-206ENST00000548771 GRAMD4Q6IC98 578 aa6.19□□□□□ -1.42
CCDC38-206ENST00000548771 CDK11AQ9UQ88 783 aaPredicted RBP6.19□□□□□ -1.42
CCDC38-206ENST00000548771 DVL2O14641 736 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 ALDH6A1Q02252 535 aaKnown RBP6.18□□□□□ -1.42
CCDC38-206ENST00000548771 SQSTM1Q13501 440 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 HS1BP3Q53T59 392 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 MIIPQ5JXC2 388 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 POLNQ7Z5Q5 900 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 C2orf69Q8N8R5 385 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 ZNF503Q96F45 646 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 ADOQ96SZ5 270 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 BOCQ9BWV1 1114 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 PLA2G12BQ9BX93 195 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 OSBPL2Q9H1P3 480 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 OR10A2Q9H208 303 aa6.18□□□□□ -1.42
CCDC38-206ENST00000548771 CDC14BO60729 498 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 MRE11P49959 708 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 IRF9Q00978 393 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms