RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TMEM266Q2M3C6 531 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 ZNF484Q5JVG2 852 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 SMAP1Q8IYB5 467 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 CMTR2Q8IYT2 770 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 KIAA0319LQ8IZA0 1049 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 BICD2Q8TD16 824 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 NEK9Q8TD19 979 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 TMEM40Q8WWA1 233 aa19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 MAFBQ9Y5Q3 323 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 MRPL42Q9Y6G3 142 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-205ENST00000548650 GRM6O15303 877 aa19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 CCT2P78371 535 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 BBXQ8WY36 941 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 LMAN2LQ9H0V9 348 aa19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 ZSWIM6Q9HCJ5 1215 aa19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 ERVK-5Q9HDB9 667 aa19.72■□□□□ 0.75
CHMP1A-205ENST00000548650 COL9A1P20849 921 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 PABPC5Q96DU9 382 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 CDHR5Q9HBB8 845 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 CD320Q9NPF0 282 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 SH3GLB2Q9NR46 395 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 TCEAL9Q9UHQ7 104 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 GINS2Q9Y248 185 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 NOC2LQ9Y3T9 749 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 PCDHA10Q9Y5I2 948 aa19.71■□□□□ 0.75
CHMP1A-205ENST00000548650 H3BQ06 376 aaPredicted RBP19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 MSH4O15457 936 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 MGEA5O60502 916 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 MMP1P03956 469 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 PSAPP07602 524 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 IL9P15248 144 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 PTCRAQ6ISU1 281 aaPredicted RBP19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 CKAP2LQ8IYA6 745 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 KHSRPQ92945 711 aaKnown RBP eCLIP19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 PLVAPQ9BX97 442 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 GABBR1Q9UBS5 961 aa19.7■□□□□ 0.74
CHMP1A-205ENST00000548650 WDR64B1ANS9 1081 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 RPS6KA5O75582 802 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 STAG3L1P0CL83 205 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 GATMP50440 423 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 NFX1Q12986 1120 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 PAN2Q504Q3 1202 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 FAM178BQ8IXR5 827 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 PPP1R16BQ96T49 567 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 OSMRQ99650 979 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 C1QTNF1Q9BXJ1 281 aa19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 UPF3BQ9BZI7 483 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-205ENST00000548650 ZNF862O60290 1169 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 SARSP49591 514 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 CAMK1Q14012 370 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 KIZQ2M2Z5 673 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 FAM43BQ6ZT52 329 aaPredicted RBP19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 FAM228AQ86W67 206 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 TRIM22Q8IYM9 498 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 LINC01465Q8N7H1 131 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 SLC5A5Q92911 643 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 P2RX5Q93086 422 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 FAM167AQ96KS9 214 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 EPHX3Q9H6B9 360 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 RAPGEFL1Q9UHV5 662 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 CEP131Q9UPN4 1083 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 SAMM50Q9Y512 469 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 CYP46A1Q9Y6A2 500 aa19.68■□□□□ 0.74
CHMP1A-205ENST00000548650 GRXCR2A6NFK2 248 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 GPR32O75388 356 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 CSPG5O95196 566 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 VTNP04004 478 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 OATP04181 439 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 USP11P51784 963 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 CLCN3P51790 818 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 CRYBB1P53674 252 aaPredicted RBP19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 NLRP5P59047 1200 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 PRKCEQ02156 737 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 HYAL1Q12794 435 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 NPY5RQ15761 445 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 UGCGQ16739 394 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 CTC1Q2NKJ3 1217 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 TRMT1LQ7Z2T5 733 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 TBCKQ8TEA7 893 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 RIT2Q99578 217 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 ALG13Q9NP73 1137 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 CLDND1Q9NY35 253 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 PCDHA4Q9UN74 947 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 ST3GAL5Q9UNP4 418 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 PLAGL2Q9UPG8 496 aa19.67■□□□□ 0.74
CHMP1A-205ENST00000548650 C9IYK1 514 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 M0R2N6 131 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 GAS7O60861 476 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 DEXIO95424 95 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 ITGB1P05556 798 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 DNAJB1P25685 340 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 LTBRP36941 435 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 SSRP1Q08945 709 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 PUS10Q3MIT2 529 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 METTL13Q8N6R0 699 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 DAGLBQ8NCG7 672 aa19.66■□□□□ 0.74
CHMP1A-205ENST00000548650 GJA10Q969M2 543 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms