RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PLAAQ9Y263 795 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 LUC7L2Q9Y383 392 aaKnown RBP8.56□□□□□ -1.04
UBR1-202ENST00000546274 DUSP10Q9Y6W6 482 aa8.56□□□□□ -1.04
UBR1-202ENST00000546274 SMAPO00193 183 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 GHRP10912 638 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 NQO1P15559 274 aaKnown RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 KCTD19Q17RG1 926 aaPredicted RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 P3H1Q32P28 736 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 TBC1D9BQ66K14 1250 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 C8orf74Q6P047 294 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 PTF1AQ7RTS3 328 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 MDM1Q8TC05 714 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 WHAMMQ8TF30 809 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 MCM9Q9NXL9 1143 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 ATXN10Q9UBB4 475 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 LY75O60449 1722 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 ZNF263O14978 683 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 HNRNPRO43390 633 aaKnown RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 KCNQ2O43526 872 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 HIP1RO75146 1068 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 HNRNPCP07910 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
UBR1-202ENST00000546274 ATP11AP98196 1134 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 GUCY2DQ02846 1103 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 KLC1Q07866 573 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 CBX3Q13185 183 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 RASIP1Q5U651 963 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 ANKRD40Q6AI12 368 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 USP17L1Q7RTZ2 530 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 LCA5Q86VQ0 697 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 ZSCAN29Q8IWY8 852 aaPredicted RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 SPATA4Q8NEY3 305 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 KLHL29Q96CT2 875 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 FAM81BQ96LP2 452 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 CAMKK2Q96RR4 588 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 TUBGCP2Q9BSJ2 902 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 TAF1DQ9H5J8 278 aaPredicted RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 EPB41L5Q9HCM4 733 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 BARHL2Q9NY43 387 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 CHMP2BQ9UQN3 213 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 MYH10P35580 1976 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 GCOM1H8Y6P7 765 aaPredicted RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 ZPR1O75312 459 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 KRT16P08779 473 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 VIL1P09327 827 aaKnown RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 MYZAPP0CAP1 466 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 PLCG1P19174 1290 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 HIBADHP31937 336 aaKnown RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 SERPINB4P48594 390 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 DNM2P50570 870 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 LACTBP83111 547 aaPredicted RBP8.55□□□□□ -1.04
UBR1-202ENST00000546274 STK4Q13043 487 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 FAM182BQ5T319 152 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 ARPC5LQ9BPX5 153 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 EXOC1Q9NV70 894 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 SNED1Q8TER0 1413 aa8.55□□□□□ -1.04
UBR1-202ENST00000546274 CCDC194A0A1B0GVG4 234 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 PALM3A6NDB9 673 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 PSMA7O14818 248 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 GSTT1P30711 240 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 TXNRD1Q16881 649 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 PABPC1LQ4VXU2 614 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 FAM47EQ6ZV65 393 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 PALB2Q86YC2 1186 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 SMCR8Q8TEV9 937 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 UCMAQ8WVF2 138 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 P3H4Q92791 437 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 DHTKD1Q96HY7 919 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 ELAC2Q9BQ52 826 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 TRIM9Q9C026 710 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 VCXQ9H320 206 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 ADAM22Q9P0K1 906 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 ATAD5Q96QE3 1844 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 ARFGEF1Q9Y6D6 1849 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 QSER1Q2KHR3 1735 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CFAP73A6NFT4 308 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 F8W031 263 aaPredicted RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 LAD1O00515 517 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CETN3O15182 167 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 E2F6O75461 281 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 FLOT1O75955 427 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 FCER1AP12319 257 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 RPL13P26373 211 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 RAD23BP54727 409 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 KCNQ4P56696 695 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 RPS8P62241 208 aaKnown RBP8.54□□□□□ -1.04
UBR1-202ENST00000546274 GRIK5Q16478 980 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 CSGALNACT2Q8N6G5 542 aa8.54□□□□□ -1.04
UBR1-202ENST00000546274 P2RX5Q93086 422 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms