RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SCAMP3O14828 347 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 NCAM2O15394 837 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 ZBTB43O43298 467 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 CD2BP2O95400 341 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 LINGO3P0C6S8 592 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 PCNAP12004 261 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 CFL1P23528 166 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 PSMC2P35998 433 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 TRIM28Q13263 835 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 TUBB2AQ13885 445 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 RASGRF1Q13972 1273 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 LETM2Q2VYF4 491 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 ZNF792Q3KQV3 632 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 Q3ZCU0 254 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 SIGIRRQ6IA17 410 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 SARM1Q6SZW1 724 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 LRRC47Q8N1G4 583 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 MRPL50Q8N5N7 158 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 CCDC63Q8NA47 563 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 SUPT20HQ8NEM7 779 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 CFAP61Q8NHU2 1237 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 SEPT8Q92599 483 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 FATE1Q969F0 183 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 HAUS1Q96CS2 278 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 ATP6V1G3Q96LB4 118 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 FGD4Q96M96 766 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 JAKMIP1Q96N16 626 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 TUBB2BQ9BVA1 445 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 UBE2OQ9C0C9 1292 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 TPK1Q9H3S4 243 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 ATP13A1Q9HD20 1204 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 PTPRHQ9HD43 1115 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 CHST12Q9NRB3 414 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 TEKT2Q9UIF3 430 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 EDARQ9UNE0 448 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 RTCBQ9Y3I0 505 aaKnown RBP5.56□□□□□ -1.52
UBE4A-203ENST00000545354 COMMD3-BMI1R4GMX3 469 aa5.56□□□□□ -1.52
UBE4A-203ENST00000545354 MAP3K19Q56UN5 1328 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 ERBINQ96RT1 1412 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CYP2D7A0A087X1C5 515 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 SNTNA6NMZ2 147 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8MH3BSY2 632 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 HIP1O00291 1037 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 RTCAO00442 366 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TOR1BO14657 336 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 STX6O43752 255 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 FKBP9O95302 570 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 C6orf222P0C671 652 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 UBTFL6P0CB48 400 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 P4HA1P13674 534 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 ATP6V1B1P15313 513 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 STMN1P16949 149 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 VCLP18206 1134 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 SYT1P21579 422 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CTNNA2P26232 953 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 EEF1GP26641 437 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TKTP29401 623 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 HNF1BP35680 557 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 KCNJ6P48051 423 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 HSPA13P48723 471 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TMED10P49755 219 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 PLCD1P51178 756 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CCNG1P51959 295 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 MAP3K7CLP57077 242 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 VBP1P61758 197 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 GNAI1P63096 354 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 MTX1Q13505 466 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TAF1CQ15572 869 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 MOGQ16653 247 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 SUPT20HL1Q3ZLR7 823 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TMEM259Q4ZIN3 620 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 ZCWPW2Q504Y3 356 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TTC39AQ5SRH9 613 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 STX12Q86Y82 276 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 HACE1Q8IYU2 909 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 LSMEM1Q8N8F7 131 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CNNM3Q8NE01 707 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 SLC22A8Q8TCC7 542 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 MGARPQ8TDB4 240 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 NSMCE1Q8WV22 266 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 OSCP1Q8WVF1 389 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 NCLNQ969V3 563 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 NUDT16Q96DE0 195 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 GPATCH1Q9BRR8 931 aaKnown RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CARD11Q9BXL7 1154 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 PPP1R12CQ9BZL4 782 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 MROH8Q9H579 483 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CCDC177Q9NQR7 707 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 HOMER2Q9NSB8 354 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 LMBRD1Q9NUN5 540 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 MRGBPQ9NV56 204 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 ZNF624Q9P2J8 865 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 DDX19BQ9UMR2 479 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 EXOC6BQ9Y2D4 811 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 SNX9Q9Y5X1 595 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CUL7Q14999 1698 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms