RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 MTHFD1LQ6UB35 978 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
TMEM258-208ENST00000545210 NME8Q8N427 588 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 KREMEN2Q8NCW0 462 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-208ENST00000545210 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
TMEM258-208ENST00000545210 RWDD1Q9H446 243 aaPredicted RBP13.16□□□□□ -0.3
TMEM258-208ENST00000545210 CDHR5Q9HBB8 845 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 ERVK-5Q9HDB9 667 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
TMEM258-208ENST00000545210 NOC2LQ9Y3T9 749 aaKnown RBP13.16□□□□□ -0.3
TMEM258-208ENST00000545210 DENND4AQ7Z401 1863 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 MAFGO15525 162 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 RPS6KA5O75582 802 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 IGHDP01880 384 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 FGFR1P11362 822 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 KLRC1P26715 233 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 KIF5BP33176 963 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 STAT5BP51692 787 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 NUBP1P53384 320 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 ACTR2P61160 394 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 PLPPR4Q7Z2D5 763 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 MAP3K14Q99558 947 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 CWH43Q9H720 699 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 C1orf112Q9NSG2 853 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
TMEM258-208ENST00000545210 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 PRR23AA6NEV1 266 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 C9IYK1 514 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 BRD1O95696 1058 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 LAG3P18627 525 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 PDE4AP27815 886 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 MTMR3Q13615 1198 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
TMEM258-208ENST00000545210 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
TMEM258-208ENST00000545210 PPP1R16BQ96T49 567 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 SMOC2Q9H3U7 446 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
TMEM258-208ENST00000545210 PUF60Q9UHX1 559 aaKnown RBP13.14□□□□□ -0.31
TMEM258-208ENST00000545210 ST3GAL5Q9UNP4 418 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 SORCS3Q9UPU3 1222 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
TMEM258-208ENST00000545210 DMXL1Q9Y485 3027 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 C2orf16Q68DN1 1984 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 DDAH1O94760 285 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
TMEM258-208ENST00000545210 PBX3P40426 434 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 NBL1P41271 181 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
TMEM258-208ENST00000545210 UBALD2Q8IYN6 164 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 NFASCO94856 1347 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 FRYLO94915 3013 aa13.13□□□□□ -0.31
TMEM258-208ENST00000545210 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
TMEM258-208ENST00000545210 C2CD4DB7Z1M9 353 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 GPR182O15218 404 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 ARP10275 920 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 RXRAP19793 462 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
TMEM258-208ENST00000545210 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 ODR4Q5SWX8 454 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 TMC7Q7Z402 723 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 NGRNQ9NPE2 291 aaKnown RBP13.12□□□□□ -0.31
TMEM258-208ENST00000545210 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
TMEM258-208ENST00000545210 FAM186AA6NE01 2351 aa13.12□□□□□ -0.31
TMEM258-208ENST00000545210 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
TMEM258-208ENST00000545210 BACH1O14867 736 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ATG7O95352 703 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 ASGR2P07307 311 aa13.11□□□□□ -0.31
TMEM258-208ENST00000545210 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms