RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 ADAM2Q99965 735 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 KRT23Q9C075 422 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 ENTPD7Q9NQZ7 604 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 LZTS1Q9Y250 596 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 NOC2LQ9Y3T9 749 aaKnown RBP10.81□□□□□ -0.68
CHD4-212ENST00000545083 PCDHA2Q9Y5H9 948 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 HCFC2Q9Y5Z7 792 aa10.81□□□□□ -0.68
CHD4-212ENST00000545083 LOXHD1Q8IVV2 1947 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 SPTBN2O15020 2390 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 M0QZ92 97 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 RPLP2P05387 115 aaKnown RBP10.8□□□□□ -0.68
CHD4-212ENST00000545083 NPR3P17342 541 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 PDE4AP27815 886 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 KRT76Q01546 638 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 TRAF1Q13077 416 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 PLCB4Q15147 1175 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 IMMTQ16891 758 aaKnown RBP10.8□□□□□ -0.68
CHD4-212ENST00000545083 KANK3Q6NY19 840 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 XRRA1Q6P2D8 792 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 FLCNQ8NFG4 579 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 SMARCC2Q8TAQ2 1214 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 GPRASP2Q96D09 838 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 ADAM7Q9H2U9 754 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 MFSD1Q9H3U5 465 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 RGS18Q9NS28 235 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 GPR179Q6PRD1 2367 aa10.8□□□□□ -0.68
CHD4-212ENST00000545083 FRYLO94915 3013 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 KMT2BQ9UMN6 2715 aaPredicted RBP10.79□□□□□ -0.68
CHD4-212ENST00000545083 ACACBO00763 2458 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 OTOGLQ3ZCN5 2332 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 SMIM35A0A1B0GVV1 85 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 KRT37O76014 449 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 LAG3P18627 525 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 TROAPQ12815 778 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 ANGPT1Q15389 498 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 TPRNQ4KMQ1 711 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 MTHFD1LQ6UB35 978 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 CWC27Q6UX04 472 aaKnown RBP10.79□□□□□ -0.68
CHD4-212ENST00000545083 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 ZDHHC14Q8IZN3 488 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 C12orf76Q8N812 135 aaPredicted RBP10.79□□□□□ -0.68
CHD4-212ENST00000545083 CASP10Q92851 521 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 NECTIN4Q96NY8 510 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 DSCC1Q9BVC3 393 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 IL25Q9H293 177 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 CNNM2Q9H8M5 875 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 NGRNQ9NPE2 291 aaKnown RBP10.79□□□□□ -0.68
CHD4-212ENST00000545083 RNF19AQ9NV58 838 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 ST3GAL5Q9UNP4 418 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 GINS2Q9Y248 185 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 UBIAD1Q9Y5Z9 338 aa10.79□□□□□ -0.68
CHD4-212ENST00000545083 DENND3A2RUS2 1198 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 C2orf71A6NGG8 1288 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 PIK3CDO00329 1044 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 CLASP2O75122 1294 aaKnown RBP10.78□□□□□ -0.68
CHD4-212ENST00000545083 RPS6KA5O75582 802 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 AOC1P19801 751 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 FAM189BP81408 668 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 ITIH3Q06033 890 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 RARS2Q5T160 578 aaKnown RBP10.78□□□□□ -0.68
CHD4-212ENST00000545083 CES5AQ6NT32 575 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 KCNT2Q6UVM3 1135 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 TMC7Q7Z402 723 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 NME8Q8N427 588 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 CUL5Q93034 780 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 ATP6V0A4Q9HBG4 840 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 TMEM161AQ9NX61 479 aa10.78□□□□□ -0.68
CHD4-212ENST00000545083 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
CHD4-212ENST00000545083 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
CHD4-212ENST00000545083 ZFHX4Q86UP3 3567 aa10.77□□□□□ -0.68
CHD4-212ENST00000545083 MTHFRP42898 656 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 MTMR1Q13613 665 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 DSC3Q14574 896 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 KIAA1841Q6NSI8 718 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 DGLUCYQ7Z3D6 616 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 FAM228AQ86W67 206 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 KIAA2013Q8IYS2 634 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 KIAA0319LQ8IZA0 1049 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 MRPL43Q8N983 215 aaKnown RBP10.77□□□□□ -0.69
CHD4-212ENST00000545083 TDRD5Q8NAT2 981 aaKnown RBP10.77□□□□□ -0.69
CHD4-212ENST00000545083 DTWD2Q8NBA8 298 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 CDHR1Q96JP9 859 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 ZNF558Q96NG5 402 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 CASD1Q96PB1 797 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 PPP1R16BQ96T49 567 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 LNPKQ9C0E8 428 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 TMEM117Q9H0C3 514 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 JPH1Q9HDC5 661 aaPredicted RBP10.77□□□□□ -0.69
CHD4-212ENST00000545083 SLC9A2Q9UBY0 812 aa10.77□□□□□ -0.69
CHD4-212ENST00000545083 CACNA1GO43497 2377 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 IFIT3O14879 490 aaKnown RBP10.76□□□□□ -0.69
CHD4-212ENST00000545083 KLRC1P26715 233 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 STAT5BP51692 787 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 ACTR2P61160 394 aa10.76□□□□□ -0.69
CHD4-212ENST00000545083 UBE2SQ16763 222 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms