RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 C22orf31O95567 290 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 OATP04181 439 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 HTRA4P83105 476 aaPredicted RBP19.09■□□□□ 0.65
HOXD8-204ENST00000544999 TMEM62Q0P6H9 643 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.09■□□□□ 0.65
HOXD8-204ENST00000544999 ARNTL2Q8WYA1 636 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 KIF2CQ99661 725 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 CERS4Q9HA82 394 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 NRBP2Q9NSY0 501 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 LOXHD1Q8IVV2 1947 aa19.09■□□□□ 0.65
HOXD8-204ENST00000544999 COL6A3P12111 3177 aa19.08■□□□□ 0.65
HOXD8-204ENST00000544999 EPOPA6NHQ4 379 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 MAGEB2O15479 319 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 ABCB7O75027 752 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 MMP1P03956 469 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 RBM25P49756 843 aaKnown RBP19.08■□□□□ 0.64
HOXD8-204ENST00000544999 PRKCEQ02156 737 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 TRMT1LQ7Z2T5 733 aaKnown RBP19.08■□□□□ 0.64
HOXD8-204ENST00000544999 KIAA0319LQ8IZA0 1049 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 SP7Q8TDD2 431 aaPredicted RBP19.08■□□□□ 0.64
HOXD8-204ENST00000544999 TNFRSF25Q93038 417 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 ZSCAN31Q96LW9 406 aaPredicted RBP19.08■□□□□ 0.64
HOXD8-204ENST00000544999 FAM20AQ96MK3 541 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 AGO3Q9H9G7 860 aaKnown RBP19.08■□□□□ 0.64
HOXD8-204ENST00000544999 KCNMB3Q9NPA1 279 aa19.08■□□□□ 0.64
HOXD8-204ENST00000544999 CDH23Q9H251 3354 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 LINC01553A4QN01 128 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 TBX3O15119 743 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 CCNT1O60563 726 aaKnown RBP19.07■□□□□ 0.64
HOXD8-204ENST00000544999 POU3F3P20264 500 aaPredicted RBP19.07■□□□□ 0.64
HOXD8-204ENST00000544999 CD52P31358 61 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 NR5A1Q13285 461 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 TRIM29Q14134 588 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 UGCGQ16739 394 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 EARS2Q5JPH6 523 aaKnown RBP19.07■□□□□ 0.64
HOXD8-204ENST00000544999 TGS1Q96RS0 853 aaKnown RBP19.07■□□□□ 0.64
HOXD8-204ENST00000544999 FTHL17Q9BXU8 183 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 COL4A6Q14031 1691 aa19.07■□□□□ 0.64
HOXD8-204ENST00000544999 RFXAPO00287 272 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 ENPP3O14638 875 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 UPP2O95045 317 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 ERVK-21P61565 698 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 PPP2R5CQ13362 524 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 KRT40Q6A162 431 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 FAM43BQ6ZT52 329 aaPredicted RBP19.06■□□□□ 0.64
HOXD8-204ENST00000544999 SPRED2Q7Z698 418 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 CCDC83Q8IWF9 413 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 YME1L1Q96TA2 773 aa19.06■□□□□ 0.64
HOXD8-204ENST00000544999 LLPHQ9BRT6 129 aaKnown RBP19.06■□□□□ 0.64
HOXD8-204ENST00000544999 SH2B1Q9NRF2 756 aaPredicted RBP19.06■□□□□ 0.64
HOXD8-204ENST00000544999 COL4A4P53420 1690 aaPredicted RBP19.05■□□□□ 0.64
HOXD8-204ENST00000544999 GTPBP6O43824 516 aaPredicted RBP19.05■□□□□ 0.64
HOXD8-204ENST00000544999 PAK2Q13177 524 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 DIS3L2Q8IYB7 885 aaKnown RBP19.05■□□□□ 0.64
HOXD8-204ENST00000544999 METTL13Q8N6R0 699 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 LINC01465Q8N7H1 131 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 PPM1EQ8WY54 764 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 VAV3Q9UKW4 847 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 PADI3Q9ULW8 664 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 TTC3P53804 2025 aa19.05■□□□□ 0.64
HOXD8-204ENST00000544999 FAM205CA6NFA0 338 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 BTBD18B2RXH4 712 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 TMOD1P28289 359 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 CLCN3P51790 818 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 FOSBP53539 338 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 CRYBB1P53674 252 aaPredicted RBP19.04■□□□□ 0.64
HOXD8-204ENST00000544999 GRB10Q13322 594 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 TARBP2Q15633 366 aaKnown RBP19.04■□□□□ 0.64
HOXD8-204ENST00000544999 XKR3Q5GH77 459 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 ODR4Q5SWX8 454 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 EFCAB12Q6NXP0 572 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 LINC01599Q8WXQ3 324 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 HAS1Q92839 578 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 MAP7D2Q96T17 732 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 NIFKQ9BYG3 293 aaKnown RBP19.04■□□□□ 0.64
HOXD8-204ENST00000544999 CDHR5Q9HBB8 845 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 GINS2Q9Y248 185 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 MTCH2Q9Y6C9 303 aa19.04■□□□□ 0.64
HOXD8-204ENST00000544999 EML1O00423 815 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 MARCH6O60337 910 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 GPR32O75388 356 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 STBD1O95210 358 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 BAG4O95429 457 aaKnown RBP19.03■□□□□ 0.64
HOXD8-204ENST00000544999 PSMC5P62195 406 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 HMGN5P82970 282 aaKnown RBP19.03■□□□□ 0.64
HOXD8-204ENST00000544999 RABEP1Q15276 862 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 SLFN12Q8IYM2 578 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 ZNF710Q8N1W2 664 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 TMEM40Q8WWA1 233 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 SAMD11Q96NU1 681 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 TSPYL2Q9H2G4 693 aaPredicted RBP19.03■□□□□ 0.64
HOXD8-204ENST00000544999 ERVK-5Q9HDB9 667 aa19.03■□□□□ 0.64
HOXD8-204ENST00000544999 SEPT9Q9UHD8 586 aaPredicted RBP19.03■□□□□ 0.64
HOXD8-204ENST00000544999 NOC2LQ9Y3T9 749 aaKnown RBP19.03■□□□□ 0.64
HOXD8-204ENST00000544999 LPXNO60711 386 aa19.02■□□□□ 0.64
HOXD8-204ENST00000544999 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
HOXD8-204ENST00000544999 RPS6KA5O75582 802 aa19.02■□□□□ 0.64
HOXD8-204ENST00000544999 VTNP04004 478 aa19.02■□□□□ 0.64
HOXD8-204ENST00000544999 TBC1D8BQ0IIM8 1120 aa19.02■□□□□ 0.64
HOXD8-204ENST00000544999 SAFBQ15424 915 aaKnown RBP eCLIP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms