RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 LRRC26Q2I0M4 334 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 TRIM60Q495X7 471 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 ANO5Q75V66 913 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 RPAINQ86UA6 219 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 RSPH3Q86UC2 560 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
SNHG1-221ENST00000544983 CYP26B1Q9NR63 512 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 SEPT9Q9UHD8 586 aaPredicted RBP13.12□□□□□ -0.31
SNHG1-221ENST00000544983 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 KIAA1024Q9UPX6 916 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 ATP11BQ9Y2G3 1177 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 PCDHA2Q9Y5H9 948 aa13.12□□□□□ -0.31
SNHG1-221ENST00000544983 SMIM35A0A1B0GVV1 85 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 GOLGA6L4A6NEF3 574 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 ZBTB42B2RXF5 422 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 DLL1O00548 723 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 B4GALT4O60513 344 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 DGAT1O75907 488 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 EYA4O95677 639 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 CLTBP09497 229 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 CMA1P23946 247 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 KLRC1P26715 233 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 CDC25AP30304 524 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 DNM2P50570 870 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 GRIN1Q05586 938 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 RBL2Q08999 1139 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 TMEM119Q4V9L6 283 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 XKR9Q5GH70 373 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 GDF6Q6KF10 455 aaPredicted RBP13.11□□□□□ -0.31
SNHG1-221ENST00000544983 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 MTHFD1LQ6UB35 978 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
SNHG1-221ENST00000544983 NME8Q8N427 588 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 RASSF8Q8NHQ8 419 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 CEP170P1Q96L14 293 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 CUEDC2Q9H467 287 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 DDX19AQ9NUU7 478 aaKnown RBP13.11□□□□□ -0.31
SNHG1-221ENST00000544983 KCND2Q9NZV8 630 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
SNHG1-221ENST00000544983 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 LOXHD1Q8IVV2 1947 aa13.11□□□□□ -0.31
SNHG1-221ENST00000544983 ARHGEF35A5YM69 484 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 PP2D1A8MPX8 630 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 EVI5O60447 810 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
SNHG1-221ENST00000544983 RARRES1P49788 294 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 BFSP2Q13515 415 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 RRAGBQ5VZM2 374 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 RESP18Q5W5W9 173 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
SNHG1-221ENST00000544983 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
SNHG1-221ENST00000544983 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 TREHO43280 583 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 MAFO75444 373 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-221ENST00000544983 C22orf31O95567 290 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 CYP2C9P11712 490 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-221ENST00000544983 IGBP1P78318 339 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 GRB10Q13322 594 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 ECM1Q16610 540 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 MTERF2Q49AM1 385 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 SHC4Q6S5L8 630 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 PIGOQ8TEQ8 1089 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 TCP11Q8WWU5 503 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 CEP89Q96ST8 783 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 MAP7D2Q96T17 732 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 LRRC27Q9C0I9 530 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
SNHG1-221ENST00000544983 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 TMEM39AQ9NV64 488 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 TBX21Q9UL17 535 aa13.09□□□□□ -0.31
SNHG1-221ENST00000544983 FAM237AA0A1B0GTK4 181 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 PLCG1P19174 1290 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 NPEPPSP55786 919 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 KARSQ15046 597 aaKnown RBP13.08□□□□□ -0.32
SNHG1-221ENST00000544983 ZRSR1Q15695 479 aaKnown RBP13.08□□□□□ -0.32
SNHG1-221ENST00000544983 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms