RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 KCNA5P22460 613 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 MRPS6P82932 125 aaKnown RBP14.11□□□□□ -0.15
ACTN1-206ENST00000544964 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 TMEM192Q8IY95 271 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.11□□□□□ -0.15
ACTN1-206ENST00000544964 EVPLQ92817 2033 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 EPHX3Q9H6B9 360 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 AGO3Q9H9G7 860 aaKnown RBP14.11□□□□□ -0.15
ACTN1-206ENST00000544964 BRMS1Q9HCU9 246 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 CDY2AQ9Y6F7 541 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 MYH9P35579 1960 aaKnown RBP14.11□□□□□ -0.15
ACTN1-206ENST00000544964 FAM205CA6NFA0 338 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 C5orf67F2Z3F1 127 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 ARP10275 920 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 INSRRP14616 1297 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 IL9P15248 144 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 SREBF1P36956 1147 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 ACTR2P61160 394 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 IGBP1P78318 339 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 GPM6BQ13491 265 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
ACTN1-206ENST00000544964 PTPROQ16827 1216 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 TCEAL5Q5H9L2 206 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 EARS2Q5JPH6 523 aaKnown RBP14.1□□□□□ -0.15
ACTN1-206ENST00000544964 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 TSHZ1Q6ZSZ6 1077 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 PIK3AP1Q6ZUJ8 805 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 TEX2Q8IWB9 1127 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 NEK9Q8TD19 979 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 TRAPPC12Q8WVT3 735 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 C1QTNF1Q9BXJ1 281 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 AGO4Q9HCK5 861 aaKnown RBP14.1□□□□□ -0.15
ACTN1-206ENST00000544964 C11orf16Q9NQ32 467 aa14.1□□□□□ -0.15
ACTN1-206ENST00000544964 PIEZO1Q92508 2521 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 CCDC194A0A1B0GVG4 234 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-206ENST00000544964 CCNE2O96020 404 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 SYT1P21579 422 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
ACTN1-206ENST00000544964 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACTN1-206ENST00000544964 CEP55Q53EZ4 464 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 RSPH3Q86UC2 560 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 CRIPAKQ8N1N5 446 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 BANK1Q8NDB2 785 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 CRYGNQ8WXF5 182 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 CLP1Q92989 425 aaKnown RBP14.09□□□□□ -0.15
ACTN1-206ENST00000544964 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 ZNF689Q96CS4 500 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-206ENST00000544964 FAM49AQ9H0Q0 323 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-206ENST00000544964 TRIOO75962 3097 aa14.09□□□□□ -0.15
ACTN1-206ENST00000544964 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-206ENST00000544964 PLXNA4Q9HCM2 1894 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 IGKV6D-21A0A0A0MT36 114 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 RRN3P2A6NIE6 340 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 MEIS1O00470 390 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 ENPP3O14638 875 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 ATG7O95352 703 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 PDCP20941 246 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 CD52P31358 61 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 CTNNB1P35222 781 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 INF2Q27J81 1249 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 PLPPR4Q7Z2D5 763 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 FAM178BQ8IXR5 827 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 FIBCD1Q8N539 461 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 TBCKQ8TEA7 893 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 PABPC5Q96DU9 382 aaKnown RBP14.08□□□□□ -0.16
ACTN1-206ENST00000544964 SDF4Q9BRK5 362 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 NSUN3Q9H649 340 aaKnown RBP14.08□□□□□ -0.16
ACTN1-206ENST00000544964 AZI2Q9H6S1 392 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 TRPV2Q9Y5S1 764 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 IGSF9BQ9UPX0 1349 aa14.08□□□□□ -0.16
ACTN1-206ENST00000544964 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 H3BQ06 376 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-206ENST00000544964 GRM6O15303 877 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 EDIL3O43854 480 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 DGKIO75912 1065 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 RPLP2P05387 115 aaKnown RBP14.07□□□□□ -0.16
ACTN1-206ENST00000544964 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 ZNF76P36508 570 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 STAT5BP51692 787 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 TMEM62Q0P6H9 643 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 PTCRAQ6ISU1 281 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-206ENST00000544964 RTN4RL1Q86UN2 441 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-206ENST00000544964 LRFN3Q9BTN0 628 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 C11orf84Q9BUA3 381 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-206ENST00000544964 FOXP1Q9H334 677 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-206ENST00000544964 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 KDM3AQ9Y4C1 1321 aa14.07□□□□□ -0.16
ACTN1-206ENST00000544964 POTEB3A0JP26 581 aa14.06□□□□□ -0.16
ACTN1-206ENST00000544964 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
ACTN1-206ENST00000544964 DDX39AO00148 427 aaKnown RBP14.06□□□□□ -0.16
ACTN1-206ENST00000544964 DHX15O43143 795 aaKnown RBP14.06□□□□□ -0.16
ACTN1-206ENST00000544964 STX6O43752 255 aa14.06□□□□□ -0.16
ACTN1-206ENST00000544964 BMPR1AP36894 532 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms