RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DEPTORQ8TB45 409 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 CABS1Q96KC9 395 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 NKIRAS1Q9NYS0 192 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 DAAM1Q9Y4D1 1078 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 USH1CQ9Y6N9 552 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 PLA2G4AP47712 749 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 CCT5P48643 541 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 IL17AQ16552 155 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 NAA35Q5VZE5 725 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 NEK9Q8TD19 979 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 NT5C1BQ96P26 610 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 SEMA6BQ9H3T3 888 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 DNAJC5Q9H3Z4 198 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 TDRD3Q9H7E2 651 aaKnown RBP6.27□□□□□ -1.41
VPS50-220ENST00000544910 SUDS3Q9H7L9 328 aaPredicted RBP6.27□□□□□ -1.41
VPS50-220ENST00000544910 KMT5AQ9NQR1 393 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 POLLQ9UGP5 575 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 HPCAL4Q9UM19 191 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 DISP2A7MBM2 1401 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 UBE4BO95155 1302 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 TJP1Q07157 1748 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 TBC1D8O95759 1140 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 ATP2A2P16615 1042 aaKnown RBP6.27□□□□□ -1.41
VPS50-220ENST00000544910 ABCD1P33897 745 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 MRPS25P82663 173 aaKnown RBP6.27□□□□□ -1.41
VPS50-220ENST00000544910 MXRA7P84157 204 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 PLCB3Q01970 1234 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 COG1Q8WTW3 980 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 TRIM11Q96F44 468 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 PNKPQ96T60 521 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 REEP2Q9BRK0 252 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 SEL1LQ9UBV2 794 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 PLAAQ9Y263 795 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 PHLPP1O60346 1717 aa6.27□□□□□ -1.41
VPS50-220ENST00000544910 HMGB1P1B2RPK0 211 aaPredicted RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 CCDC188H7C350 402 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 CIB2O75838 187 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 JAK3P52333 1124 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 DR1Q01658 176 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MESDQ14696 234 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 STRIP1Q5VSL9 837 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 RTKN2Q8IZC4 609 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 POMGNT1Q8WZA1 660 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 FAM81BQ96LP2 452 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 RIOX1Q9H6W3 641 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SEPT9Q9UHD8 586 aaPredicted RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 TUBGCP6Q96RT7 1819 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 A0A087WUV0 522 aaPredicted RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 DLATP10515 647 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 HSPA6P17066 643 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 BRD2P25440 801 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 ANXA13P27216 316 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MAN1A1P33908 653 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ZBTB16Q05516 673 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SLC18A3Q16572 532 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 EDRF1Q3B7T1 1238 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 FIGNQ5HY92 759 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 DCAF15Q66K64 600 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MIS18BP1Q6P0N0 1132 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 RHOT2Q8IXI1 618 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SPATA4Q8NEY3 305 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 TNFRSF25Q93038 417 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MAK16Q9BXY0 300 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 VCX3BQ9H321 246 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 RAB20Q9NX57 234 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SMIM22K7EJ46 135 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SORBS3O60504 671 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MYBP10242 640 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 RFX1P22670 979 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SOX5P35711 763 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MIGA2Q7L4E1 593 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 MMGT1Q8N4V1 131 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ATP6V0A1Q93050 837 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 CCDC127Q96BQ5 260 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ZNF653Q96CK0 615 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS50-220ENST00000544910 LRRC1Q9BTT6 524 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ANKZF1Q9H8Y5 726 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ZCCHC17Q9NP64 241 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 DOT1LQ8TEK3 1739 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 PITPNM2Q9BZ72 1349 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 GAS8O95995 478 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 NR1D1P20393 614 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 YWHAEP62258 255 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 FUT2Q10981 343 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 PAPD7Q5XG87 772 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 C15orf52Q6ZUT6 534 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 DPH6Q7L8W6 267 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 IQCGQ9H095 443 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 AZI2Q9H6S1 392 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 TFR2Q9UP52 801 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 CAPN7Q9Y6W3 813 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ADAMTS7Q9UKP4 1686 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 EIF3DO15371 548 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS50-220ENST00000544910 RAD17O75943 681 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ATF2P15336 505 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 POLGP54098 1239 aaPredicted RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 PPARDQ03181 441 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms