RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 MYL3P08590 195 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 AKR1B1P15121 316 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 TARSP26639 723 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 VCPP55072 806 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 DAB2P98082 770 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 RBL2Q08999 1139 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 MRPL58Q14197 206 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 PWP2Q15269 919 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 TKFCQ3LXA3 575 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 ALDH1L2Q3SY69 923 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 KIAA1211Q6ZU35 1233 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 LRRC8DQ7L1W4 858 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 ADSSL1Q8N142 457 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 FAM133AQ8N9E0 248 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 GTPBP3Q969Y2 492 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 ABHD17AQ96GS6 310 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 FGD4Q96M96 766 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 MPHOSPH6Q99547 160 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 RIOK1Q9BRS2 568 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 API5Q9BZZ5 524 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 SLC38A10Q9HBR0 1119 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 ALG13Q9NP73 1137 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 DCP1AQ9NPI6 582 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 PIH1D3Q9NQM4 214 aaKnown RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 IGSF5Q9NSI5 407 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 RNF19AQ9NV58 838 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 ABI2Q9NYB9 513 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-220ENST00000544550 CNTN3Q9P232 1028 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 FEM1BQ9UK73 627 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 RWDD3Q9Y3V2 267 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 RIPK3Q9Y572 518 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 GBF1Q92538 1859 aa4.87□□□□□ -1.63
SNHG1-220ENST00000544550 CHD9Q3L8U1 2897 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 MED19A0JLT2 244 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 LOC730098B7Z3J9 87 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 EYA4O95677 639 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 RB1P06400 928 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FGFR3P22607 806 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 ICAM3P32942 547 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 LTBRP36941 435 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 NDUFV1P49821 464 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 HTRA4P83105 476 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 KRT76Q01546 638 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 CNTN2Q02246 1040 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 SPEM2Q0P670 501 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 PUM1Q14671 1186 aaKnown RBP eCLIP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 CBX2Q14781 532 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 TTF1Q15361 905 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 PTGISQ16647 500 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 TNNI3KQ59H18 835 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 TAPT1Q6NXT6 567 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FAM117BQ6P1L5 589 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 TMCO2Q7Z6W1 182 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 SESTD1Q86VW0 696 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FBXO11Q86XK2 927 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 CLEC10AQ8IUN9 316 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FBXO16Q8IX29 292 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 RPAP2Q8IXW5 612 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 TMEM192Q8IY95 271 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 MYOCDQ8IZQ8 938 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 VWA5B2Q8N398 1253 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 C1orf127Q8N9H9 656 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 OR6J1Q8NGC5 347 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 SSH1Q8WYL5 1049 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 PMEPA1Q969W9 287 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 ASIC4Q96FT7 647 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FRMD6Q96NE9 622 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 YME1L1Q96TA2 773 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 SLC30A3Q99726 388 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 DBNDD2Q9BQY9 259 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 C11orf84Q9BUA3 381 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 RAVER2Q9HCJ3 691 aaKnown RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 ATP8A2Q9NTI2 1148 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 ZFATQ9P243 1243 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 ADD3Q9UEY8 706 aaKnown RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 SYNPO2Q9UMS6 1093 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 EMSYQ7Z589 1322 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FOCADQ5VW36 1801 aa4.86□□□□□ -1.63
SNHG1-220ENST00000544550 FSD2A1L4K1 749 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 C5orf67F2Z3F1 127 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 F5H6K3 240 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 EREGO14944 169 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 MMP20O60882 483 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 NBNO60934 754 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 MAP3K6O95382 1288 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 NDUFB10O96000 172 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 RARAP10276 462 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 CKBP12277 381 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 CD33P20138 364 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 GNA15P30679 374 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 CDK8P49336 464 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 KLRC3Q07444 240 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 HYAL1Q12794 435 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 COASYQ13057 564 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 OS9Q13438 667 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-220ENST00000544550 PPP2R5BQ15173 497 aa4.85□□□□□ -1.63
SNHG1-220ENST00000544550 CLUL1Q15846 466 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms