RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 LARP4BQ92615 738 aaKnown RBP10.61□□□□□ -0.71
YBX3-215ENST00000544504 RAD54LQ92698 747 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 DYDC2Q96IM9 177 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 CCDC43Q96MW1 224 aaKnown RBP10.61□□□□□ -0.71
YBX3-215ENST00000544504 UIMC1Q96RL1 719 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 PBX4Q9BYU1 374 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 KATNBL1Q9H079 304 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 AZI2Q9H6S1 392 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 TMEM39AQ9NV64 488 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 CXXC1Q9P0U4 656 aaPredicted RBP10.61□□□□□ -0.71
YBX3-215ENST00000544504 SERTAD1Q9UHV2 236 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
YBX3-215ENST00000544504 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 PHF24Q9UPV7 400 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 KIAA1024Q9UPX6 916 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 Q9Y3F1 56 aa10.61□□□□□ -0.71
YBX3-215ENST00000544504 A0A087X0B3 334 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 POTEB3A0JP26 581 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 BACH1O14867 736 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
YBX3-215ENST00000544504 PQBP1O60828 265 aaKnown RBP10.6□□□□□ -0.71
YBX3-215ENST00000544504 MED24O75448 989 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 EYA4O95677 639 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 CCNE2O96020 404 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 SUPT20HL2P0C7V6 817 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 SPATA31C1P0DKV0 1188 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 BMP1P13497 986 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 AKR1A1P14550 325 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 SLC26A2P50443 739 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 ADGRE1Q14246 886 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
YBX3-215ENST00000544504 LY6KQ17RY6 165 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 AAK1Q2M2I8 961 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 ZSCAN23Q3MJ62 389 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 POTEBQ6S5H4 581 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 SASS6Q6UVJ0 657 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 TPH2Q8IWU9 490 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 FAM167AQ96KS9 214 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 SPATA33Q96N06 139 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 PNMA5Q96PV4 448 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 LXNQ9BS40 222 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 LRFN3Q9BTN0 628 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 ANKEF1Q9NU02 776 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 KBTBD4Q9NVX7 518 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 RMND1Q9NWS8 449 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 KCND2Q9NZV8 630 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
YBX3-215ENST00000544504 PPME1Q9Y570 386 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 LOXHD1Q8IVV2 1947 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 TRANK1O15050 2925 aa10.6□□□□□ -0.71
YBX3-215ENST00000544504 NCOR1O75376 2440 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 MCM3APO60318 1980 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 PPFIA4O75335 1185 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 CAVIN2O95810 425 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 IGFBP4P22692 258 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 PBX2P40425 430 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 ZNF445P59923 1031 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 SP2Q02086 613 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 CYP4A11Q02928 519 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 ARHGAP1Q07960 439 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 CAMK4Q16566 473 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 NAALADL2Q58DX5 795 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 CNNM4Q6P4Q7 775 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 RNF180Q86T96 592 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 EXOC8Q8IYI6 725 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 PPTC7Q8NI37 304 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 SMARCE1Q969G3 411 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 PAGE5Q96GU1 130 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 TOX2Q96NM4 488 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
YBX3-215ENST00000544504 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.59□□□□□ -0.712e-23■□□□□ 10.4
YBX3-215ENST00000544504 AP5M1Q9H0R1 490 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 SMARCAD1Q9H4L7 1026 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 SPC25Q9HBM1 224 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 ZNF302Q9NR11 478 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 RGL1Q9NZL6 768 aa10.59□□□□□ -0.71
YBX3-215ENST00000544504 EMSYQ7Z589 1322 aa10.58□□□□□ -0.71
YBX3-215ENST00000544504 PIEZO1Q92508 2521 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 IGKV6D-21A0A0A0MT36 114 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 ARHGEF35A5YM69 484 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 DCDC2CA8MYV0 355 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 KPNA6O60684 536 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 LGR5O75473 907 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 ARIH2O95376 493 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 TIMP1P01033 207 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 PLA2G4BP0C869 781 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 ZNF865P0CJ78 1059 aaPredicted RBP10.58□□□□□ -0.72
YBX3-215ENST00000544504 RARBP10826 455 aa10.58□□□□□ -0.72
YBX3-215ENST00000544504 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms