RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ABHD10Q9NUJ1 306 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 ESYT2A0FGR8 921 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 MUM1L1Q5H9M0 696 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 ABCD1P33897 745 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 PPP6R3Q5H9R7 873 aaPredicted RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 GABBR1Q9UBS5 961 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 DENND3A2RUS2 1198 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 CLCN6P51797 869 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 NFU1Q9UMS0 254 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 OVOS2A0A0J9YW53 1432 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 WDR91A4D1P6 747 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 TEX33O43247 280 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 ASPHQ12797 758 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 OVOS2Q6IE36 1432 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 TYW5A2RUC4 315 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 EIF3CLB5ME19 914 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 CTNND1O60716 968 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 XPAP23025 273 aaPredicted RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 PSMA2P25787 234 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 SATB1Q01826 763 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 SURF1Q15526 300 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 MAPK6Q16659 721 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 MMEL1Q495T6 779 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 NSUN4Q96CB9 384 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 CFAP36Q96G28 342 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 FAM20AQ96MK3 541 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 EIF3CQ99613 913 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 ABCB6Q9NP58 842 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 ADAM22Q9P0K1 906 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 NOVA2Q9UNW9 492 aaKnown RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 BNIP3LO60238 219 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 RAB3IPQ96QF0 476 aaPredicted RBP13.78□□□□□ -0.2
CHD4-211ENST00000544484 INPP5FQ9Y2H2 1132 aa13.78□□□□□ -0.2
CHD4-211ENST00000544484 HIP1RO75146 1068 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 MCPH1Q8NEM0 835 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 RNF14Q9UBS8 474 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 CNOT8Q9UFF9 292 aaKnown RBP13.77□□□□□ -0.2
CHD4-211ENST00000544484 CRB1P82279 1406 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 IPO5O00410 1097 aaKnown RBP13.77□□□□□ -0.2
CHD4-211ENST00000544484 SUN1O94901 812 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 NT5C2P49902 561 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 RWDD2BP57060 319 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 TRIM28Q13263 835 aaKnown RBP13.77□□□□□ -0.2
CHD4-211ENST00000544484 SEPT6Q14141 434 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 TMEM270Q6UE05 265 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.77□□□□□ -0.22e-7■■■■□ 19.3
CHD4-211ENST00000544484 FMO2Q99518 471 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.2
CHD4-211ENST00000544484 PNPLA6Q8IY17 1366 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 ACSL3O95573 720 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 FCER1AP12319 257 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 NNTQ13423 1086 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
CHD4-211ENST00000544484 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 RNF139Q8WU17 664 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 SAAL1Q96ER3 474 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 GDAP1Q8TB36 358 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 TRIM56Q9BRZ2 755 aaKnown RBP13.77□□□□□ -0.21
CHD4-211ENST00000544484 TULP4Q9NRJ4 1543 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 LDHAP00338 332 aaKnown RBP13.77□□□□□ -0.21
CHD4-211ENST00000544484 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 ZNF746Q6NUN9 644 aaPredicted RBP13.77□□□□□ -0.21
CHD4-211ENST00000544484 SGMS1Q86VZ5 419 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 TCP11Q8WWU5 503 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 SH2D3AQ9BRG2 576 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 SLC12A6Q9UHW9 1150 aa13.77□□□□□ -0.21
CHD4-211ENST00000544484 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 ZBED1O96006 694 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 KNOP1Q1ED39 458 aaKnown RBP13.76□□□□□ -0.21
CHD4-211ENST00000544484 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 SARM1Q6SZW1 724 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 CYFIP1Q7L576 1253 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 RHPN2Q8IUC4 686 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
CHD4-211ENST00000544484 CEP72Q9P209 647 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms