RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 DPEP1P16444 411 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 PON1P27169 355 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 USP8P40818 1118 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 U2AF1L4Q8WU68 220 aaKnown RBP17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 NOX5Q96PH1 765 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 ALS2CR12Q96Q35 445 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 KRT12Q99456 494 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 FIGNQ5HY92 759 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 KCTD16Q68DU8 428 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 EP400NLQ6ZTU2 488 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 OTOP1Q7RTM1 612 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 GANQ9H2C0 597 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 LTBP1Q14766 1721 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 DDX42Q86XP3 938 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 EHBP1Q8NDI1 1231 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 KCNK3O14649 394 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 RNF40O75150 1001 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 FAM153BP0C7A2 387 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 PPP1R2P41236 205 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 NT5C2P49902 561 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 FAM153CQ494X1 144 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 FAM153AQ9UHL3 310 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 CCPG1Q9ULG6 757 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 AFPP02771 609 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 SERPING1P05155 500 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 GLI1P08151 1106 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 CARSP49589 748 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 DLG4P78352 724 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 CBWD6Q4V339 395 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 CBWD3Q5JTY5 395 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 CBWD5Q5RIA9 395 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 SYCP3Q8IZU3 236 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 TSEN2Q8NCE0 465 aaKnown RBP17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 GMCL1Q96IK5 515 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 LXNQ9BS40 222 aa17.27■□□□□ 0.36
SNRNP70-203ENST00000544278 GUCY2DQ02846 1103 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 HYIQ5T013 277 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.26■□□□□ 0.352e-7■□□□□ 9.6
SNRNP70-203ENST00000544278 GLYCTKQ8IVS8 523 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 OSGEPQ9NPF4 335 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 NFU1Q9UMS0 254 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 CYP3A7-CYP3A51PA0A087WV96 503 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 PLSCR1O15162 318 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 ZBTB7AO95365 584 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 ITGB5P18084 799 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 CYP3A7P24462 503 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 SLC15A2Q16348 729 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 SLC35C1Q96A29 364 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 HNRNPH3P31942 346 aaKnown RBP17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 NPEPPSP55786 919 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 IQCEQ6IPM2 695 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 TRIM31Q9BZY9 425 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 TSPYL1Q9H0U9 437 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 HPCAL4Q9UM19 191 aa17.26■□□□□ 0.35
SNRNP70-203ENST00000544278 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 CKAP4Q07065 602 aaKnown RBP17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 PRPF4BQ13523 1007 aaKnown RBP17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 PHLDB2Q86SQ0 1253 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 FAM186BQ8IYM0 893 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 SH2D3CQ8N5H7 860 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 GMCL1P1Q8NEA9 526 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 KAT5Q92993 513 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 EPB41L5Q9HCM4 733 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 GRID2IPA4D2P6 1211 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 TMEM110-MUSTN1A8MSY1 372 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 IPO5O00410 1097 aaKnown RBP17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 CEP104O60308 925 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 SYF2O95926 243 aaKnown RBP17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 C8orf74Q6P047 294 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 CENPHQ9H3R5 247 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 TAS2R14Q9NYV8 317 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 POTEB2H3BUK9 544 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 PAFAH1B1P43034 410 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 SLC18A3Q16572 532 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 Q4G0T1 1027 aa17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 ALKBH5Q6P6C2 394 aaKnown RBP17.25■□□□□ 0.35
SNRNP70-203ENST00000544278 IRF2BP2Q7Z5L9 587 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms