RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 DEAF1O75398 565 aaPredicted RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 GFPT2O94808 682 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 OSBPP22059 807 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 VCPP55072 806 aaKnown RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 TFAMQ00059 246 aaKnown RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 CUL1Q13616 776 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 NUGGCQ68CJ6 796 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 FAM133AQ8N9E0 248 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 LARP4BQ92615 738 aaKnown RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ZFYVE9O95405 1425 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 KRT87PA6NCN2 255 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 CCND2P30279 289 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ANKS3Q6ZW76 656 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 FANCBQ8NB91 859 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ZWILCHQ9H900 591 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ARHGEF5Q12774 1597 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 PJA2O43164 708 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 SLC9A1P19634 815 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 RECQLP46063 649 aaPredicted RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 GTF2IP78347 998 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 WASHC5Q12768 1159 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 SURF1Q15526 300 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 MAN2A1Q16706 1144 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 KRT24Q2M2I5 525 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 PNMA1Q8ND90 353 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 P2RX5Q93086 422 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 OTULINQ96BN8 352 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 TRIM8Q9BZR9 551 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 SLC7A5P2Q9GIP4 190 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 KDM5CP41229 1560 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 GOLGA8HP0CJ92 632 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 CCNA1P78396 465 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 AARS2Q5JTZ9 985 aaKnown RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ZBTB33Q86T24 672 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 TTC8Q8TAM2 541 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 BTN2A2Q8WVV5 523 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 CLIC6Q96NY7 704 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ELAC2Q9BQ52 826 aaKnown RBP11.13□□□□□ -0.63
PCDH9-204ENST00000544246 CASS4Q9NQ75 786 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 ARHGEF12Q9NZN5 1544 aa11.13□□□□□ -0.63
PCDH9-204ENST00000544246 H0Y626 953 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ZBTB7BO15156 539 aaPredicted RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 TRIM16O95361 564 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SERPING1P05155 500 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 FAM180AQ6UWF9 173 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 BRINP3Q76B58 766 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 OTUD7AQ8TE49 926 aaPredicted RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 GCNT4Q9P109 453 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 TMEM63CQ9P1W3 806 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ZNF711Q9Y462 761 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 PFKFB2O60825 505 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 PDHA1P08559 390 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 CEP78Q5JTW2 689 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SLFN13Q68D06 897 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ADCK1Q86TW2 530 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 GFM2Q969S9 779 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SUCLG2Q96I99 432 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 TM6SF1Q9BZW5 370 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 NDE1Q9NXR1 346 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ADA2Q9NZK5 511 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 STOML1Q9UBI4 398 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 DIS3Q9Y2L1 958 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 H0Y3Z8 333 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 KITP10721 976 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 NDUFA8P51970 172 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ARL4CP56559 192 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 MFSD14BQ5SR56 506 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 FSD1LQ9BXM9 530 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SAYSD1Q9NPB0 183 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 GLI2P10070 1586 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 USP17L21D6R901 530 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 PRPF4O43172 522 aaKnown RBP eCLIP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 GSPT1P15170 499 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 RINLQ6ZS11 566 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 EXOC4Q96A65 974 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 BTBD6Q96KE9 485 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 DONSONQ9NYP3 566 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ABCC12Q96J65 1359 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 TJP3O95049 919 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 ARIH2O95376 493 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 DEPDC1Q5TB30 811 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 MMS22LQ6ZRQ5 1243 aa11.12□□□□□ -0.63
PCDH9-204ENST00000544246 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
PCDH9-204ENST00000544246 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms