RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZBTB41Q5SVQ8 909 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 PAQR3Q6TCH7 311 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 UNQ6494/PRO21346Q6UXR6 183 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 EPM2AIP1Q7L775 607 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-207ENST00000544052 RTN4RL1Q86UN2 441 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-207ENST00000544052 RELTQ969Z4 430 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 HSPBAP1Q96EW2 488 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 CCDC120Q96HB5 630 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 RNF32Q9H0A6 362 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 UCKL1Q9NWZ5 548 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 RBPJLQ9UBG7 517 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 INVSQ9Y283 1065 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 PPP2R3BQ9Y5P8 575 aa4.86□□□□□ -1.63
SCFD1-207ENST00000544052 CUX2O14529 1486 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 BAZ1BQ9UIG0 1483 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PRAMEF22A3QJZ6 481 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GOLGA6CA6NDK9 693 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GOLGA6BA6NDN3 693 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GOLGA6DP0CG33 693 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 RAC2P15153 192 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 ENPP1P22413 925 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 MC4RP32245 332 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 MANFP55145 182 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 KRT85P78386 507 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 FSCN1Q16658 493 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 ZNF792Q3KQV3 632 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 TMEM240Q5SV17 173 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 ADGRF1Q5T601 910 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PRAMEF18Q5VWM3 479 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 SLC4A10Q6U841 1118 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 RPTNQ6XPR3 784 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 TTLL7Q6ZT98 887 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 CILP2Q8IUL8 1156 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 LILRA2Q8N149 483 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 C7orf31Q8N865 590 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 HIPK4Q8NE63 616 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PEX11GQ96HA9 241 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PDGFDQ9GZP0 370 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 QRSL1Q9H0R6 528 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PRDM12Q9H4Q4 367 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 RC3H2Q9HBD1 1191 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GOLGA6AQ9NYA3 693 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 NUDT5Q9UKK9 219 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GOLGA6L22H0YM25 854 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 IL33O95760 270 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 FAHP16930 419 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PRR5P85299 388 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 RBM10P98175 930 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 SNX17Q15036 470 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GFOD2Q3B7J2 385 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 PITRM1Q5JRX3 1037 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 EFCAB2Q5VUJ9 269 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 FYB2Q5VWT5 728 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 CXorf57Q6NSI4 855 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 TIFAQ96CG3 184 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 ACAP3Q96P50 834 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 TUBGCP5Q96RT8 1024 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 MYL10Q9BUA6 226 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 BTBD7Q9P203 1132 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 USP36Q9P275 1121 aaKnown RBP4.85□□□□□ -1.63
SCFD1-207ENST00000544052 GIT1Q9Y2X7 761 aa4.85□□□□□ -1.63
SCFD1-207ENST00000544052 UBA6A0AVT1 1052 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-207ENST00000544052 PRSS38A1L453 326 aa4.84□□□□□ -1.63
SCFD1-207ENST00000544052 DBPQ10586 325 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-207ENST00000544052 RAB3GAP1Q15042 981 aa4.84□□□□□ -1.63
SCFD1-207ENST00000544052 PHYKPLQ8IUZ5 450 aa4.84□□□□□ -1.63
SCFD1-207ENST00000544052 ABHD4Q8TB40 342 aa4.84□□□□□ -1.63
SCFD1-207ENST00000544052 ARNT2Q9HBZ2 717 aa4.84□□□□□ -1.63
SCFD1-207ENST00000544052 CHST12Q9NRB3 414 aa4.84□□□□□ -1.63
SCFD1-207ENST00000544052 PNMA8BQ9ULN7 279 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-207ENST00000544052 YBX2Q9Y2T7 364 aaKnown RBP4.84□□□□□ -1.63
SCFD1-207ENST00000544052 CAND2O75155 1236 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 PRPF6O94906 941 aaKnown RBP4.84□□□□□ -1.64
SCFD1-207ENST00000544052 PRLP01236 227 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 LRG1P02750 347 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 KRT18P05783 430 aaKnown RBP4.84□□□□□ -1.64
SCFD1-207ENST00000544052 AGXTP21549 392 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 AOAHP28039 575 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 STAT5AP42229 794 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 MTNR1BP49286 362 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 RGS3P49796 1198 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 ERVFRD-1P60508 538 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 HERVK_113P62684 666 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 MYBPC3Q14896 1274 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 PRAMEF9Q5VWM5 478 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 ESPNLQ6ZVH7 1005 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 KCNK18Q7Z418 384 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 NME9Q86XW9 330 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 CCAR1Q8IX12 1150 aaKnown RBP4.84□□□□□ -1.64
SCFD1-207ENST00000544052 PPM1NQ8N819 430 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 TTLL11Q8NHH1 800 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 CLIP3Q96DZ5 547 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 SLC39A2Q9NP94 309 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 OBP2AQ9NY56 170 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 DTLQ9NZJ0 730 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 KCNG1Q9UIX4 513 aa4.84□□□□□ -1.64
SCFD1-207ENST00000544052 LAMC3Q9Y6N6 1575 aa4.83□□□□□ -1.64
SCFD1-207ENST00000544052 ERCC6Q03468 1493 aa4.83□□□□□ -1.64
SCFD1-207ENST00000544052 NFIBO00712 420 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms