RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 CDH23Q9H251 3354 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 ENPP3O14638 875 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 OATP04181 439 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
VPS37B-204ENST00000543590 UGCGQ16739 394 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 EARS2Q5JPH6 523 aaKnown RBP16.11■□□□□ 0.17
VPS37B-204ENST00000543590 PPP4R3AQ6IN85 833 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 MIER3Q7Z3K6 550 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 SP7Q8TDD2 431 aaPredicted RBP16.11■□□□□ 0.17
VPS37B-204ENST00000543590 TGS1Q96RS0 853 aaKnown RBP16.11■□□□□ 0.17
VPS37B-204ENST00000543590 KIF2CQ99661 725 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 NRBP2Q9NSY0 501 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 WDR81Q562E7 1941 aa16.11■□□□□ 0.17
VPS37B-204ENST00000543590 POU3F3P20264 500 aaPredicted RBP16.1■□□□□ 0.17
VPS37B-204ENST00000543590 KRT2P35908 639 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 ERVK-21P61565 698 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 PRKCEQ02156 737 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 NR5A1Q13285 461 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 TNFRSF25Q93038 417 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 YME1L1Q96TA2 773 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 CDHR5Q9HBB8 845 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 PADI3Q9ULW8 664 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 GINS2Q9Y248 185 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 EVPLQ92817 2033 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 MAGEB2O15479 319 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 GTPBP6O43824 516 aaPredicted RBP16.1■□□□□ 0.17
VPS37B-204ENST00000543590 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
VPS37B-204ENST00000543590 GRB10Q13322 594 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 METTL13Q8N6R0 699 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 NAP1L4Q99733 375 aaKnown RBP16.1■□□□□ 0.17
VPS37B-204ENST00000543590 MTUS1Q9ULD2 1270 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 MTCH2Q9Y6C9 303 aa16.1■□□□□ 0.17
VPS37B-204ENST00000543590 LPXNO60711 386 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 MMP1P03956 469 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 FOSBP53539 338 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 PAK2Q13177 524 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 TRIM29Q14134 588 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 KRT40Q6A162 431 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 EFCAB12Q6NXP0 572 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 RTN4RL1Q86UN2 441 aaPredicted RBP16.09■□□□□ 0.17
VPS37B-204ENST00000543590 CCDC83Q8IWF9 413 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 MICALL1Q8N3F8 863 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 FTHL17Q9BXU8 183 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 SUGCTQ9HAC7 445 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 PRDM6Q9NQX0 595 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 CHD7Q9P2D1 2997 aa16.09■□□□□ 0.17
VPS37B-204ENST00000543590 LOXHD1Q8IVV2 1947 aa16.08■□□□□ 0.17
VPS37B-204ENST00000543590 BTBD18B2RXH4 712 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 EML1O00423 815 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 DLL1O00548 723 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 TBX3O15119 743 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 VTNP04004 478 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 RBM25P49756 843 aaKnown RBP16.08■□□□□ 0.16
VPS37B-204ENST00000543590 CLCN3P51790 818 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 KIZQ2M2Z5 673 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 TMEM266Q2M3C6 531 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 XKR3Q5GH77 459 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
VPS37B-204ENST00000543590 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 GDPD5Q8WTR4 605 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 TMEM40Q8WWA1 233 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 HAS1Q92839 578 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 PPP1R16BQ96T49 567 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 C17orf80Q9BSJ5 609 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 VAV3Q9UKW4 847 aa16.08■□□□□ 0.16
VPS37B-204ENST00000543590 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 GPR32O75388 356 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 RPS6KA5O75582 802 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 STBD1O95210 358 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 CRYBB1P53674 252 aaPredicted RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 NFX1Q12986 1120 aaKnown RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 TARBP2Q15633 366 aaKnown RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 LLPHQ9BRT6 129 aaKnown RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 NIFKQ9BYG3 293 aaKnown RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 TMX1Q9H3N1 280 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
VPS37B-204ENST00000543590 TTC3P53804 2025 aa16.07■□□□□ 0.16
VPS37B-204ENST00000543590 MARCH6O60337 910 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 TMOD1P28289 359 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 PSMC5P62195 406 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 FBXO22Q8NEZ5 403 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 MAP7D2Q96T17 732 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 OSMRQ99650 979 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 TSPYL2Q9H2G4 693 aaPredicted RBP16.06■□□□□ 0.16
VPS37B-204ENST00000543590 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
VPS37B-204ENST00000543590 AKT3Q9Y243 479 aa16.06■□□□□ 0.16
VPS37B-204ENST00000543590 COL4A6Q14031 1691 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms