RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 KRT81Q14533 505 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 GUF1Q8N442 669 aaKnown RBP20.86■□□□□ 0.93
SUDS3-204ENST00000543473 MS4A14Q96JA4 679 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 PPFIA2O75334 1257 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.85■□□□□ 0.93
SUDS3-204ENST00000543473 ECT2Q9H8V3 914 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 THEGQ9P2T0 379 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 TRPC6Q9Y210 931 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 RNF8O76064 485 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 POLR2BP30876 1174 aaKnown RBP20.85■□□□□ 0.93
SUDS3-204ENST00000543473 SEC24CP53992 1094 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 SCYL2Q6P3W7 929 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 NLRX1Q86UT6 975 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 POMGNT1Q8WZA1 660 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 EDEM3Q9BZQ6 932 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 PCIF1Q9H4Z3 704 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 POTEMA6NI47 508 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 H3BQF6 201 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 FOXO4P98177 505 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 LRRC14Q15048 493 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 ANKRD40Q6AI12 368 aa20.85■□□□□ 0.93
SUDS3-204ENST00000543473 SRGNP10124 158 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 BRAFP15056 766 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 YWHAEP62258 255 aaKnown RBP20.84■□□□□ 0.93
SUDS3-204ENST00000543473 ZNF211Q13398 564 aaPredicted RBP20.84■□□□□ 0.93
SUDS3-204ENST00000543473 PDXDC1Q6P996 788 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 EIF4E1BA6NMX2 242 aaKnown RBP20.84■□□□□ 0.93
SUDS3-204ENST00000543473 TMOD1P28289 359 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 SCARF1Q14162 830 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 ADSSL1Q8N142 457 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 DEPTORQ8TB45 409 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 ZIM3Q96PE6 472 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 LRRC37BQ96QE4 947 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 DNAJC12Q9UKB3 198 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 GYG2O15488 501 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 SMIM5Q71RC9 77 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 IL17RAQ96F46 866 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 VWDEQ8N2E2 1590 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 SLC16A2P36021 539 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 MXI1P50539 228 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 UBE2SQ16763 222 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 CDAN1Q8IWY9 1227 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 SYT2Q8N9I0 419 aaPredicted RBP20.84■□□□□ 0.93
SUDS3-204ENST00000543473 KCNB2Q92953 911 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 SERPINB13Q9UIV8 391 aa20.84■□□□□ 0.93
SUDS3-204ENST00000543473 H7C0C1 242 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 FCER1AP12319 257 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 ATP5OP48047 213 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 ABCB5Q2M3G0 1257 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 WDR93Q6P2C0 686 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 HAUS1Q96CS2 278 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 CSRNP1Q96S65 589 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 IFT122Q9HBG6 1241 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 RBM12Q9NTZ6 932 aaKnown RBP20.83■□□□□ 0.93
SUDS3-204ENST00000543473 CPDO75976 1380 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 RAD17O75943 681 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 PARVGQ9HBI0 331 aa20.83■□□□□ 0.93
SUDS3-204ENST00000543473 A0A0G2JND7 137 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 BYSLQ13895 437 aaKnown RBP20.83■□□□□ 0.92
SUDS3-204ENST00000543473 CCDC93Q567U6 631 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 GABPB2Q8TAK5 448 aaPredicted RBP20.83■□□□□ 0.92
SUDS3-204ENST00000543473 FAM205CA6NFA0 338 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 ADRA2BP18089 450 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 NLRP7Q8WX94 980 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 CCDC17Q96LX7 622 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 CYTH2Q99418 400 aa20.83■□□□□ 0.92
SUDS3-204ENST00000543473 RIMS1Q86UR5 1692 aaKnown RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 GSG1L2A8MUP6 293 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 SLC12A2P55011 1212 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 PDE1BQ01064 536 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 DMP1Q13316 513 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 KCTD1Q719H9 257 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 ST13P4Q8IZP2 240 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 SMARCAL1Q9NZC9 954 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 FAM187AA6NFU0 413 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 PHF20L1A8MW92 1017 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 TTLL1O95922 423 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 PLS3P13797 630 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 PRDX5P30044 214 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 EPM2AIP1Q7L775 607 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 MXD3Q9BW11 206 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 BHMT2Q9H2M3 363 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 ATF5Q9Y2D1 282 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 MRPL11Q9Y3B7 192 aaKnown RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 LRRIQ3A6PVS8 624 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 GIPC1O14908 333 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 CARSP49589 748 aaKnown RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 RABL6Q3YEC7 729 aaPredicted RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 TGS1Q96RS0 853 aaKnown RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 CENPKQ9BS16 269 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 TRIM55Q9BYV6 548 aa20.82■□□□□ 0.92
SUDS3-204ENST00000543473 MRPL47Q9HD33 250 aaKnown RBP20.82■□□□□ 0.92
SUDS3-204ENST00000543473 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 LRRN4CLQ8ND94 238 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 CDKL2Q92772 493 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 OSBPL1AQ9BXW6 950 aa20.81■□□□□ 0.92
SUDS3-204ENST00000543473 BATF3Q9NR55 127 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms